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SCNpilot_BF_INOC_scaffold_715_24

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(26503..30126)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 999.99
  • Bit_score: 1811
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 999.99
  • Bit_score: 1811
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003810D05 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 999.99
  • Bit_score: 1799
  • Evalue 0.0

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3624
ATGGAATTTAACGAGTTTGAATCAATTAAAATTGGTCTGGCATCACCCGAACAGATAAGAGAATGGTCCCGGGGAGAAGTAAAAAAACCCGAAACCATTAACTATAGAACCTTAAAACCGGAAAGAGACGGTCTTTTCTGCGAAAAGATTTTTGGACCCCAGAAGGACTGGGAATGTCACTGCGGAAAATACAAGCGTATCCGCTATAAGGGTAAAATCTGTGAACGCTGCGGTGTTGAAGTAACCCGTTCCAAGGTTCGCCGCGAGCGTATGGGAAGCATTGAGCTTGCCGCCCCCGTATCCCATATCTGGTACTTTAAAACAATTCCCTCAAGAATGGGTCTTATTCTTGACATTTCACCCAGAAACCTGGAGCAGGTTCTGTATTTTTCTCAATATATCGTCACCAGTCCGGGCAATACACCCTTGGTGAAGATGCAGCTTCTGAACGAAAAGCAGTATTATGATATGCGTGAAAAATATGAGGACGATTTTGAAGCCGGTATGGGTGCGGAAGCAATCAAAAAGCTTTTGCTGGAAATTGACCTTGAGAAAATGAGCAATGAGCTGAAGGAAGAGCTGGAAACCGCAACAGGTCAAAAACGCGTCAGAATTTTAAAGCGTCTTGAGGTTACCGAGGCATTCAGACTCTCCAATAATCGTCCCGAGTGGATGATCATGGACGTGCTTCCGGTCATTCCGCCGGATATCCGTCCGATGGTACAGCTGGACGGCGGTCGGTTTGCCACCTCTGATTTAAATGATTTATACAGAAGAGTCATCAACCGTAACAACCGGTTGAGAAGACTGCTTGATTTAGGCGCACCGGACATCATTGTCCGCAATGAAAAGAGAATGCTGCAGGAAGCGGTTGACGCACTCATCGACAACGGCCGCCGGGGCAGACCGGTGACCGGACCGAACAACCGTCCGCTGAAATCCCTTTCCGATATGTTAAAGGGTAAACAGGGCCGTTTCCGTCAGAACCTGCTGGGTAAACGTGTTGACTATTCCGGTCGTTCCGTTATCGTGGTCGGTCCGGAGCTCAAGATTTATCAGTGCGGTCTGCCAAAGGAAATGGCGCTGGAGCTGTTCAAGCCCTTTGTTATGAAGCGCCTTGTGGAAACCGGCATTTCCGGCAACATCAAATCCGCCCGTAAAATGGTGGAGCGTGCCAAAACCGAGGTTTGGGACGCTTTAGAAATTGTCATCAAAAACCATCCGGTGCTCTTGAACCGTGCGCCGACGCTGCACAGACTGGGTATCCAGGCTTTCGAGCCGGTTTTGGTAGAAGGCAGAGCATTGAAGCTTCACCCCTTGGTTTGTACCGCATACAACGCCGACTTTGACGGCGACCAGATGGCGGTTCACGTTCCTCTTTCCGCAGAAGCACAGGCAGAGGCCCGTATACTCATGCTGGCTGCCAACAATCTTCTAAAGCCCTCTGACGGAAAGCCCGTAACGGTTCCGACCCAGGACATGGTTCTCGGTTCTTATTACCTTACTCTTGTAAAACCCGAAGAGCCGGGTGCAGGCAAGGTGTTCCGTGACAAAAACGAAGCGATTATGGCGTATGACGACGGAATCGTCGGTCTGCACGCACCTATTAAGGTGAGAATTACCGCAGATTTTAAGGGCAAATCCGTAACAAGAATTATTGACGCTACGGTCGGGTTCCTGATTTTCAACGAATCCATTCCCCAGAACCTTGGTTATGTTGACCGTTCTGTGGAGGGAAGAGAGCTTGATCTGGAAATCGGGCTGTACCGTGAAGAAAAGGGAGTCAAGGTCGTCAACAAGATCGGTAAGAACCAGCTGGGTAAAATCATTGACCGCTGTATCAGAGTCAATGGTACCTCTGTCACCGCCGAGGTTCTTGATAAAGTGAAATCTACCGGATTCAAGTATTCCACCAAAGCTGCAATCACCATTTCCGTTGCCGATGCGGTCATTCCGCCCATCAAAGCAGAAAAGATTGCGGAAGCAGAGCACAAAATCGATTTAATCACCAGAGACTTCCGCCGTGGTCTGATCTCCAACGACGAGCGTTCCCGCCTTGTCATTGAGGTTTGGGATGATGCCGTTAAGGTCATTTCCAACGCATTGCAGGATAATCTGGACGAATACAATCCCATTTTCATGATGGCTGATTCCGGCGCCCGTGGTTCCATGAGCCAAATCAGACAGCTGGCAGGTATGCGTGGACTGCTCGCCAGCACCACCGGTAAGACCATCGAGGTTCCCATCCGGGCAAACTACCGTGAAGGTCTGAACGTTCTCGAATACTTCATCTCTTCCCGTGGTGCAAGAAAGGGTCTTGCCGATACAGCTCTTCGTACGGCGGACTCAGGCTATCTGACCCGTCGTCTTGTGGATGTTTCTCAGGATGTTATCATCAGAGAAGACGACTGCGGTGCTACGGAAGGCTTATGGGTCAGCGATGTTATGGACGGCCGTCAGCTGATTGAGCCCTTTGCCGACCGTTTGATGGGCAGATATTTGGCAGAGCCTCTGGTGCACGAGGATACCGGCGAAATCATTATGGACACCGACAAGATGATGACCGAGTTCGATGCGAACGCCATCATCAAGCAGGGTGTAAAAAAAGCGCACATCAGGTCCATATTAAATTGTAAAGCTAGATACGGCGTGTGTAAAAAATGCTACGGAGCGAACCTGGCAACCGGTGATCCTGTCACAACCGGTGAAGCGGTCGGCATCATCGCCGCCCAGTCCATCGGTGAGCCGGGTACCCAGCTTACCATGCGTACCTTCCACACCGGCGGTATCGCTAGTGCCGACGATATTACACAGGGTCTTCCCCGTGTGGAAGAGCTTTTTGAAGGCAGAAAACCCAAGCGTTCCGGGTTTATTTCGGAGATTGACGGTATTATCAGATTTGAAGAAGTGAAGAAGAACCGTGAAATCGTGGTTACGAGCACGGACACCCAGAACCTTGAGGAACGCAGATATACCATTCCCTTCGGCTACCGTATTATCGTCAGCGAAGGCGATCTTGTTACTAAGGGCGACAGCCTCACCGAGGGTGCGGTCAACCCCCACGATATTTTGGCGATTAAGGGCACAGAAGCTGTCCAAAACTATATCATAGCACAAGTACAGAGCGTTTACCGCTTACAGGGTGTTGATATCAACGATAAGCACATCGAGGTTATCGTTCGCCAGATGATGAGAAAAGTCAGAATTATGGATCCCGGCGACACCAAACTGTTACCGAGCAACTTAGTGGAGCGCAGCGAAATGATTTCTGAAAACGAAATGATTGCAAAGAGAACGGCTGCCGGCGAACAGGGTCTTCGCACTGCCACCTATGAAGATACGCTGCTGGGTATCACAAAGGCGTCTCTCGCAACCGACAGCTTCTTGTCTGCGGCATCCTTCCAGGAAACCACAAGAGTTCTCACCGATGCAGCCATCAAGGGTAAAATTGATCCCCTGTTCGGGCTCAAAGAAAACGTTATCATCGGTAAGCTCATTCCGGCGGGAACCGGCATGAAATGCTACAGCGGAGGAAGCGCCGTTGTCGCGGAAGAAAAAACCGGTTTTAACGGAATAGACGAAGTTCTCGAGCTGGACGACGAAGACGAATTTTCAATGGATTAA
PROTEIN sequence
Length: 1208
MEFNEFESIKIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCEKIFGPQKDWECHCGKYKRIRYKGKICERCGVEVTRSKVRRERMGSIELAAPVSHIWYFKTIPSRMGLILDISPRNLEQVLYFSQYIVTSPGNTPLVKMQLLNEKQYYDMREKYEDDFEAGMGAEAIKKLLLEIDLEKMSNELKEELETATGQKRVRILKRLEVTEAFRLSNNRPEWMIMDVLPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPNNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQCGLPKEMALELFKPFVMKRLVETGISGNIKSARKMVERAKTEVWDALEIVIKNHPVLLNRAPTLHRLGIQAFEPVLVEGRALKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAANNLLKPSDGKPVTVPTQDMVLGSYYLTLVKPEEPGAGKVFRDKNEAIMAYDDGIVGLHAPIKVRITADFKGKSVTRIIDATVGFLIFNESIPQNLGYVDRSVEGRELDLEIGLYREEKGVKVVNKIGKNQLGKIIDRCIRVNGTSVTAEVLDKVKSTGFKYSTKAAITISVADAVIPPIKAEKIAEAEHKIDLITRDFRRGLISNDERSRLVIEVWDDAVKVISNALQDNLDEYNPIFMMADSGARGSMSQIRQLAGMRGLLASTTGKTIEVPIRANYREGLNVLEYFISSRGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGATEGLWVSDVMDGRQLIEPFADRLMGRYLAEPLVHEDTGEIIMDTDKMMTEFDANAIIKQGVKKAHIRSILNCKARYGVCKKCYGANLATGDPVTTGEAVGIIAAQSIGEPGTQLTMRTFHTGGIASADDITQGLPRVEELFEGRKPKRSGFISEIDGIIRFEEVKKNREIVVTSTDTQNLEERRYTIPFGYRIIVSEGDLVTKGDSLTEGAVNPHDILAIKGTEAVQNYIIAQVQSVYRLQGVDINDKHIEVIVRQMMRKVRIMDPGDTKLLPSNLVERSEMISENEMIAKRTAAGEQGLRTATYEDTLLGITKASLATDSFLSAASFQETTRVLTDAAIKGKIDPLFGLKENVIIGKLIPAGTGMKCYSGGSAVVAEEKTGFNGIDEVLELDDEDEFSMD*