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SCNpilot_BF_INOC_scaffold_715_25

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(30140..32746)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 876.0
  • Bit_score: 1372
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 880.0
  • Bit_score: 1364
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sporosphaeroides RepID=UPI000373E83F similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 875.0
  • Bit_score: 1376
  • Evalue 0.0

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Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2607
GTGCTTCGTGAAATCATGGACGAAAATGAGTCACAGGAAGACATCAAGGCTGCCGTCAAAGCACGCCTTTCCGATTTGATTCCCAATCACATTACGCTGGACGATATGTTTGCTTCCATCAGCTACCTGTGCGGTCTTGCCCACGGTATCGGTGTGATTGACGACATTGACCATTTGGGAAACAGACGAATCCGTTCTGTCGGTGAGCTGTTACAAAACCAGTTCCGCATCGGCTTTGCCCGTATGGAACGTGTTGTCCGTGAAAAAATGACCCTGCAGTCACAGGATACGGACATTATTACCCCCCAGACACTCATTAATATCCGTCCCGTGGTTGCGGCCATTAGAGAATTCTTTGGTTCTTCGCCGCTGTCCCAGTTCATGGATCAGACCAACCCGCTGGCGGAATTGACACATAAAAGAAGACTTTCCGCACTCGGACCGGGCGGTTTGTCCCGTGACCGTGCAGGATTTGAGGTTCGTGACGTTCATTACAGCCATTACGGCCGTATGTGTGCCATCGAAACCCCGGAAGGTCCTAACATCGGTTTGATTTCTTATCTTGCCACCTTTGCCCGTATCAATGAATACGGCTTTATCGAAGCGCCATTCCGTAAAATCGACAAAACCACCGGTATTGTGTTGGACGAGGTTCATTACATGACCGCTGATGTGGAGGACGAATTCATCGTGGCACAGGCCAACGAACCACTGAATGCGGAAGGACGTTTTACCGGCAAAAAAGTCAATGCCAGAAGCAAGGATGAATTCCTCGAAATCGAAAGCAGCTATGCGGATTATATGGACGTTTCCCCAAAAATGCTTGTTTCGGTTGCTACTGCTATGATCCCCTTCCTTGAAAACGACGATGCCAACCGTGCACTCATGGGTTCCAACATGCAGCGTCAGGCTGTGCCGTTGTTAAAAACCGAATCCCCCATTGTGGGCACCGGCATGGAATACAAGGCTGCGGTTGACTCCGGTGTTTGTGTGGTTACCAAGCGCGGCGGTCTTGTCACCAAGGTTACTGCTGATTCGATCGAAATCAAAGCCGAAACCGGCGAGATCGATACCTATAAATTAACAAAATTCTTACGTTCCAACCAAGGAACCTGTATCAATCAGAGACCGATTGTCAGCGAGGGACAGAGAGTAACAACCAAAGAGGTGATTGCAGACGGTCCTTCCACCTCCAACGGAGAAATCAGCATTGGTAAAAACGTTCTCATCGGCTTTATGACATGGGAAGGTTATAACTACGAAGATGCGATTCTGCTCAATGAGAAGATTGTTCGTGACGATGTGTTTACCTCGGTTCACATTGAGGAATACGAGATTGAAAGCCGTGACACCAAGCTGGGACCGGAAGAAATTACTCGTGACATTCCCAACGTGGGTGAAGATGCACTGAAAGATCTTGACGAACGCGGGATCATCCGTGTTGGCGCCGAGGTTCGCTCCGGTGACATACTGGTCGGCAAGGTTACCCCGAAGGGTGAAACCGAGTTGACGGCGGAAGAACGGCTGCTTCGTGCTATTTTCGGCGAAAAGGCACGTGAGGTTCGGGATACATCCATGAGAGTTCCCCACGGCGAATGCGGTACTGTTGTTGATGTGAAGGTGTTTACCCGTGAAAATAGTTCAGAGCTCAATCCGGGCATCAATATGGTCGTCCGTTGTTACCTTGCCCAGAAGCGTAAGATTTCTGTGGGCGATAAAATGGCGGGTCGTCACGGAAACAAAGGTGTTGTTTCCCGTATTTTACCGGAAGAGGATATGCCGTTCTTACCGGACGGTACACCGCTGGATATCATCTTAAATCCCTTGGGCGTTCCGTCCCGTATGAACATCGGTCAGGTGCTTGAGGTTCATCTTGGCTATGCCGCCAAGGCGCTTGGCTGGAAGATTTGTACCCCTGTTTTCGATGGTGCTCACGAAGCCGACATCCGTGAATGCCTTACAATGGCAGGCTACAGCGAAAACGGAAAGACCCAGCTGTATGATGGTCGTGACGGTCGTCCCTTCGACAACCCCGTCACCGTGGGCTACATGTATTTCTTAAAGCTTCACCACTTGGTTGATGATAAAATCCATGCCCGTTCCACCGGTCCGTATTCTCTTGTTACCCAGCAGCCGTTGGGCGGTAAAGCCCAGTTCGGCGGACAGCGTTTCGGAGAAATGGAAGTTTGGGCGCTGGAGGCATACGGTGCATCCTATACCCTGCAGGAAATCCTTACGGTCAAGTCCGACGATGTTGTGGGTCGTGTGAAGACCTATGAATCCATCGTGAAGGGTCAGAATGTGCCGAAGCCGGGTATTCCGGAGTCCTTTAAGGTTCTCATCAAGGAATTACAGTCACTGGCACTTGATGTTAAGGTTCTGGACGGGAACAACGATGAAATTGACCTGAAGCAAAGCTTTGATGACGACGATGATACCATCCTGACAACGCCGGCTGCCGACACACTGATCGAGCCGCTGATTGCCGATACACTGGAAGGCTTCGAGACCCTGGATGATGACGGGGACTTCATCGAAGATGATATTTTGGAAGATGAAGAAATCGCTGATGACGCTGACGACGCTGATGACAGCGAGATAATGTAA
PROTEIN sequence
Length: 869
VLREIMDENESQEDIKAAVKARLSDLIPNHITLDDMFASISYLCGLAHGIGVIDDIDHLGNRRIRSVGELLQNQFRIGFARMERVVREKMTLQSQDTDIITPQTLINIRPVVAAIREFFGSSPLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGRMCAIETPEGPNIGLISYLATFARINEYGFIEAPFRKIDKTTGIVLDEVHYMTADVEDEFIVAQANEPLNAEGRFTGKKVNARSKDEFLEIESSYADYMDVSPKMLVSVATAMIPFLENDDANRALMGSNMQRQAVPLLKTESPIVGTGMEYKAAVDSGVCVVTKRGGLVTKVTADSIEIKAETGEIDTYKLTKFLRSNQGTCINQRPIVSEGQRVTTKEVIADGPSTSNGEISIGKNVLIGFMTWEGYNYEDAILLNEKIVRDDVFTSVHIEEYEIESRDTKLGPEEITRDIPNVGEDALKDLDERGIIRVGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSMRVPHGECGTVVDVKVFTRENSSELNPGINMVVRCYLAQKRKISVGDKMAGRHGNKGVVSRILPEEDMPFLPDGTPLDIILNPLGVPSRMNIGQVLEVHLGYAAKALGWKICTPVFDGAHEADIRECLTMAGYSENGKTQLYDGRDGRPFDNPVTVGYMYFLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEILTVKSDDVVGRVKTYESIVKGQNVPKPGIPESFKVLIKELQSLALDVKVLDGNNDEIDLKQSFDDDDDTILTTPAADTLIEPLIADTLEGFETLDDDGDFIEDDILEDEEIADDADDADDSEIM*