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SCNpilot_bf_inoc_scaffold_163_curated

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_163_curated_1
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..3069
DNA (3069bp) protein (1023aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S6P4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD90495.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_163_curated_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3128..6379
DNA (3252bp) protein (1084aa)
Beta-mannosidase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A515_BACTN
beta-mannosidase rbh
Beta-mannosidase {ECO:0000313|EMBL:AAO77539.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
SCNpilot_bf_inoc_scaffold_163_curated_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6402..7622
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6ATA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27016.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_163_curated_4
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7907..8902
DNA (996bp) protein (332aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=B3CH25_9BACE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDV05439.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
xylosidase/arabinosidase
SCNpilot_bf_inoc_scaffold_163_curated_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8913..10886
DNA (1974bp) protein (658aa)
sialic acid-specific 9-O-acetylesterase; K05970 sialate O-acetylesterase [EC:3.1.1.53] rbh
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UZW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88318.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
SCNpilot_bf_inoc_scaffold_163_curated_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10948..11679
DNA (732bp) protein (244aa)
Protein involved in gliding motility GldA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5T1_PALPW
gliding motility protein glda; K09687 antibiotic transport system ATP-binding protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_163_curated_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11689..12705
DNA (1017bp) protein (339aa)
holliday junction DNA helicase subunit ruvb; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5T2_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_163_curated_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12712..14178
DNA (1467bp) protein (489aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase n=1 Tax=Parabacteroides sp. D25 RepID=K5ZF63_9PORP
SCNpilot_bf_inoc_scaffold_163_curated_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14252..15088
DNA (837bp) protein (279aa)
Putative DNA-binding protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R870_BACSH
Uncharacterized protein {ECO:0000313|EMBL:KKB51988.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
DNA-binding protein
SCNpilot_bf_inoc_scaffold_163_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15091..15459
DNA (369bp) protein (123aa)
Ribosome-binding factor A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6R9_PALPW
ribosome-binding factor a; K02834 ribosome-binding factor A
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_163_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15452..16717
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6S0_PALPW
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80414.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_163_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16714..17346
DNA (633bp) protein (211aa)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_163_curated_13
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17360..18607
DNA (1248bp) protein (416aa)
Anaerobic sulfatase maturase n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S6U0_9PORP
Anaerobic sulfatase-maturase {ECO:0000313|EMBL:KHM48893.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
anaerobic sulfatase-maturase; K06871 uncharacterized protein
SCNpilot_bf_inoc_scaffold_163_curated_14
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18913..19740
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IG73_PSYTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU69492.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
SCNpilot_bf_inoc_scaffold_163_curated_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19783..20535
DNA (753bp) protein (251aa)
Caspase domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EXT6_9BACE
Caspase domain protein {ECO:0000313|EMBL:EFA20472.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
peptidase C14 caspase catalytic subunit p20
SCNpilot_bf_inoc_scaffold_163_curated_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20547..21233
DNA (687bp) protein (229aa)
FHA domain containing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJT2_9BACT
FHA domain containing protein {ECO:0000313|EMBL:CCH54157.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ABC transporter ATP-binding protein
SCNpilot_bf_inoc_scaffold_163_curated_17
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21297..22571
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CVT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA75566.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_163_curated_18
unknown

Not on your lists

22584..23096
DNA (513bp) protein (171aa)
Forkhead-associated protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIG4_RUNSL
Forkhead-associated protein
SCNpilot_bf_inoc_scaffold_163_curated_19
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23159..23926
DNA (768bp) protein (256aa)
serine/threonine phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JMZ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50568.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
SCNpilot_bf_inoc_scaffold_163_curated_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23935..25683
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003823E03
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADB38980.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_bf_inoc_scaffold_163_curated_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25732..26652)
DNA (921bp) protein (307aa)
riboflavin biosynthesis protein ribf; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Riboflavin biosynthesis protein RibF n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T842_PALPW
SCNpilot_bf_inoc_scaffold_163_curated_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26663..26869)
DNA (207bp) protein (69aa)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_163_curated_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27156..29573
DNA (2418bp) protein (806aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5H4_PALPW
Uncharacterized protein {ECO:0000313|EMBL:ADQ79968.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_163_curated_24
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29673..31619)
DNA (1947bp) protein (649aa)
FG-GAP repeat protein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W5Z4_9BACT
FG-GAP repeat protein {ECO:0000313|EMBL:EFA92011.1}; TaxID=679190 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis ATCC 35310.;"
SCNpilot_bf_inoc_scaffold_163_curated_25
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31735..33645)
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EJ96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU91012.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
ragB/SusD family protein
SCNpilot_bf_inoc_scaffold_163_curated_26
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33654..36713)
DNA (3060bp) protein (1020aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E5D7_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKU91011.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
tonB-dependent Receptor Plug domain-containing protein
SCNpilot_bf_inoc_scaffold_163_curated_27
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36735..38414)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HFM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY55817.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_163_curated_28
unknown

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38639..38782
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_163_curated_29
unknown

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comp(38927..39454)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_163_curated_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39515..40726)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375C938
GntR family transcriptional regulator {ECO:0000313|EMBL:CEA16412.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
GntR family transcriptional regulator
Displaying items 1-30 of 111 in total

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