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SCNpilot_bf_inoc_scaffold_194_curated

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_194_curated_1
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1503)
DNA (1503bp) protein (501aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Ig-like domain-containing surface protein
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AET68683.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
SCNpilot_bf_inoc_scaffold_194_curated_2
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1518..1985)
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N8WKE2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPR81100.1}; TaxID=1330047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter junii MTCC 11364.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_3
unknown

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comp(2122..2337)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_194_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2759..4420)
DNA (1662bp) protein (554aa)
amp-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N7_PALPW
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ78981.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_5
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4500..5204)
DNA (705bp) protein (235aa)
s-adenosylmethionine-dependent methytransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IEL5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38784.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
SCNpilot_bf_inoc_scaffold_194_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5206..7146)
DNA (1941bp) protein (647aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N9_PALPW
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
ABC transporter related protein {ECO:0000313|EMBL:ADQ78983.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_7
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7143..9083)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9HC74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY51184.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
polysaccharide biosynthesis protein CapD
SCNpilot_bf_inoc_scaffold_194_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9261..10079
DNA (819bp) protein (273aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2P1_PALPW
SCNpilot_bf_inoc_scaffold_194_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10102..10947)
DNA (846bp) protein (282aa)
ABC-2 type transporter n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3L0_PALPW
ABC transporter; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_10
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10952..12049)
DNA (1098bp) protein (366aa)
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) RepID=B0TXL6_FRAP2
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_194_curated_11
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12054..13103)
DNA (1050bp) protein (350aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CF65_9BACE
SCNpilot_bf_inoc_scaffold_194_curated_12
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13668..17945
DNA (4278bp) protein (1426aa)
alpha-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40] rbh
Alpha-L-rhamnosidase protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QX64_9BACT
Alpha-L-rhamnosidase protein {ECO:0000313|EMBL:EGG51514.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
SCNpilot_bf_inoc_scaffold_194_curated_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17960..19639
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003649F0B
Uncharacterized protein {ECO:0000313|EMBL:KKB58754.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19650..22295
DNA (2646bp) protein (882aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B697_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17111.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
alpha-rhamnosidase rbh
SCNpilot_bf_inoc_scaffold_194_curated_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22685..25954
DNA (3270bp) protein (1090aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036B1BD2
Collagen-binding protein {ECO:0000313|EMBL:KIA96975.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_194_curated_16
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25981..27927
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003729E1A
Uncharacterized protein {ECO:0000313|EMBL:KIA96974.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_194_curated_17
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27950..29155
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037EDF41
Uncharacterized protein {ECO:0000313|EMBL:KIA96871.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
galactose-binding like protein
SCNpilot_bf_inoc_scaffold_194_curated_18
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29181..30305
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JDV5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60863.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
coagulation factor 5/8 type domain-containing protein
SCNpilot_bf_inoc_scaffold_194_curated_19
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30344..32047
DNA (1704bp) protein (568aa)
Uncharacterized protein n=2 Tax=Bacteroides salyersiae RepID=I8YIC6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY62147.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
alpha-L-arabinofuranosidase B family protein
SCNpilot_bf_inoc_scaffold_194_curated_20
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32060..34024
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9HPK8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY62149.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
putative secreted ATP/GTP binding protein
SCNpilot_bf_inoc_scaffold_194_curated_21
Prevotella sp. CAG:487, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34146..35762
DNA (1617bp) protein (539aa)
Putative starch binding domain protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PCF4_9BACT
Putative starch binding domain protein {ECO:0000313|EMBL:CCZ14230.1}; TaxID=1262928 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:487.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_22
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38156..38998
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F500_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95311.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_23
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39081..41018
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9HPK8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY62149.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
coagulation factor 5/8 type domain-containing protein
SCNpilot_bf_inoc_scaffold_194_curated_24
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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41477..42619
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=4628727 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
SCNpilot_bf_inoc_scaffold_194_curated_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42688..43173)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8X638_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY45582.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_26
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(43223..43657)
DNA (435bp) protein (145aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
lysozyme (EC:3.2.1.17)
Muraminidase n=1 Tax=Pelistega sp. HM-7 RepID=V8G8L0_9BURK
SCNpilot_bf_inoc_scaffold_194_curated_27
unknown

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comp(43614..44171)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_194_curated_28
unknown

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comp(44178..44849)
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_194_curated_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(44862..46895)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI00036A08C1
Collagen triple helix repeat family protein {ECO:0000313|EMBL:EXZ30856.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
phage-related protein; prophage LambdaBa01, minor structural protein
SCNpilot_bf_inoc_scaffold_194_curated_30

Not on your lists

comp(46912..48612)
DNA (1701bp) protein (567aa)
Prophage MuMc02 head decoration protein putative n=1 Tax=uncultured phage MedDCM-OCT-S08-C1441 RepID=D6PFL0_9VIRU
Phage-related tail fiber protein {ECO:0000313|EMBL:AFX83854.1}; TaxID=1262073 species="Viruses; environmental samples.;" source="uncultured Mediterranean phage MEDS2 group.;"
prophage MuMc02, head decoration protein
Displaying items 1-30 of 115 in total

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