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SCNpilot_bf_inoc_scaffold_194_curated

Search features with annotation key words

Displaying items 91-115 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_194_curated_91
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100463..100942
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=4090897 bin=GWF2_Bacteroidetes_33_16 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_92
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100973..101959
DNA (987bp) protein (329aa)
UPF0365 protein HMPREF9008_02958 n=2 Tax=Parabacteroides RepID=E1YZ43_9PORP
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_93
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(102213..104294)
DNA (2082bp) protein (694aa)
peptidyL-dipeptidase dcp (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:ADQ79000.1}; EC=3.4.15.5 {ECO:0000313|EMBL:ADQ79000.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptidyl-dipeptidase Dcp n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q6_PALPW
SCNpilot_bf_inoc_scaffold_194_curated_94
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104295..105608)
DNA (1314bp) protein (438aa)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_95
unknown

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comp(105824..105958)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_194_curated_96
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

106053..106445
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JD36_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EFI16678.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_194_curated_97
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106622..108157
DNA (1536bp) protein (512aa)
Sugar transferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H4_PALPW
sugar transferase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_98
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

108368..110104
DNA (1737bp) protein (579aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q8_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_99
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(110106..113441)
DNA (3336bp) protein (1112aa)
transcriptioN-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M4_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_100
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113462..114388)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T215_PALPW
transcriptional regulator, lysr family; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADQ78759.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_101
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114388..114885)
DNA (498bp) protein (166aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.12); K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptide methionine sulfoxide reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T213_PALPW
SCNpilot_bf_inoc_scaffold_194_curated_102
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114907..115269)
DNA (363bp) protein (121aa)
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.11 1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ADY52979.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ADY52979.1};; EC=1.8.4.12 {ECO:0000313|EMBL:ADY52979.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE53_PEDSD
SCNpilot_bf_inoc_scaffold_194_curated_103
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(115269..115736)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T212_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_104
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(115733..116716)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T208_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78752.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_105
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(116726..117058)
DNA (333bp) protein (111aa)
Protein translocase subunit yajC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T207_PALPW
protein translocase subunit yajc; K03210 preprotein translocase subunit YajC
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_106
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(117096..118043)
DNA (948bp) protein (316aa)
N utilization substance protein B homolog n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T206_PALPW
nusb antitermination factor; K03625 N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_107
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

118218..118619
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T203_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78747.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_194_curated_108
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(119054..122149)
DNA (3096bp) protein (1032aa)
Cation/multidrug efflux pump id=3343227 bin=GWF2_Bacteroidetes_42_66 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
cation/multidrug efflux pump
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_194_curated_109
unknown

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comp(122162..122533)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_194_curated_110
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(122538..123596)
DNA (1059bp) protein (353aa)
RND family efflux transporter, MFP subunit n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZ88_OWEHD
RND family efflux transporter, MFP subunit
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_194_curated_111
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123634..124962)
DNA (1329bp) protein (443aa)
Outer membrane protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPM9_SOLCM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AFD05927.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_bf_inoc_scaffold_194_curated_112
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(125129..126256)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Prevotella maculosa OT 289 RepID=H1HN66_9BACT
DNA-binding transcriptional regulator ChbR {ECO:0000313|EMBL:GAF01745.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_194_curated_113
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(126495..128054)
DNA (1560bp) protein (520aa)
IS66 family transposase, partial id=3842685 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_bf_inoc_scaffold_194_curated_114
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(128120..128416)
DNA (297bp) protein (99aa)
Transposase orf1, IS66 family protein id=4388612 bin=GWF2_Bacteroidetes_40_14 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
transposase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_194_curated_115
unknown

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comp(128475..128774)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying items 91-115 of 115 in total

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