ggKbase home page

SCNpilot_bf_inoc_scaffold_194_curated_99

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(110106..113441)

Top 3 Functional Annotations

Value Algorithm Source
transcriptioN-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 999.99
  • Bit_score: 1637
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M4_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 999.99
  • Bit_score: 1637
  • Evalue 0.0
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1668
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3336
TTGTACAGTCAACATCCGCAAATAATTGCGTTAAACGACTGGGTTAATTCGAACGGAAAAAATGTGGAAATTTCCGGATTGAATGGTTCGGCATTTTCATTAATGATATCTTCGCTATATAATAAATCTTTAGAAACTTCATCAAAACAGCATTATATCCTAATAATGGAAGATGCTGATGAGGCTGCTTATACTTACCACGATATTAAAAACTGTATAGGCGAAGATGATGTTTTCTTTTTTCCATCCTCGTATAAAAAGGCGATTAAACTATCTCAATTAGATGCTTCTAACGAAATTTTACGAACAGGAGTTTTAAATCGACTGACAAATCACAAATTGCCTTCTATCGTTGTTACATATCCGGAAGCCTTGTTCCAAAAGGTTGTTTCTGCATATGGCATTCAAACATTTATTATAAAACTTAGGAAAGGTGAGTCTATCAGCATCGATTTTTTATCGGAATTATTGCTTGAATATGGCTTTTCTCGTGTTGATTTTGTTTACGAACCCGGACAGTTTTCTGTACGAGGCGGGATAGTGGATATTTTCTCTTTTTCATATGAGTTACCTTACAGATTCGATTTTTTTGGAGATGAAATTGACTCTATAAGGATATTTGATATCGAAAGCCAGTTGTCTAAAGAACAAGTTGAGCAGGTTGAAATAATCCCTGATTTACAGAAACATAAATCTGTTAAGCAAGTTTCATTTTTTGAGTTTATAGATAAAAATTCAATATTGAGTTTTGCTAATACCGGTTTTATTAAAGATAAAATTAATCAGCTTTATGATGATGCACTGATTCAGGCAAATAAAGGTGAAGATATTATTGCCGATTTAAAAGACATTAGAATTACAGGTGATGATTTTTTAGATCAAATCGACAGTTTTCGCAAAATTATTACGCATGATAAAACGAGAATAAAAGCTGATAAAAGAATTGAATTTAAGACTTCTCCTCAACCGATTTTCCATAAGAATTTTGATTTAATATCTGAAAATCTTAAAAAGGGGATGATGGATGGCTATCAGTTGTTTATAATGAGTGATAGCGTAAAACAAACCGATAGAATTGATAGTATTTTTAAAGATAGAGGTGATAATATTGTCTTTCAGGCTATTAAAAATACATTACATCAGGGCTTTATCGACCATGATATGTCGTTTTATTGTTATACCGACCATCAGATTTTCGATAGATTTCATAAATATCGGTTGCGTACCGACAAGACTCGTCAAGGTAAAGTCGTAATGACACTTAAAGAGCTGAATCAGTTTCAGTTGGGCGATTATATGGTGCATGTCGATCATGGTATTGGGACTTTCGGCGGATTAGTTAAGACTGCCGTAAATGGTAAAATGCAGGAAATGGTGAAGCTGATTTATAGAGATGATGATATAATCTTTGTAAGTATTCACTCATTACATCGCATTTCAAAATATAAAGGAAAAGAAGGTGAAGCTCCTAAAATAAATAAATTAGGTTCAGGTGCTTGGGAGCGTTTAAAGGAAAGAACTAAATCTAAGGTAAAAGATATTGCTCGCGAACTGATTAAATTGTATGCTAAGAGAAAGGCAGAGCAAGGATTTCAGTTTACGCCGGATAGTTATATGCAACAGGAATTGGAAGCCTCGTTTATCTACGAAGATACTCCCGATCAGGTAAAAGCAACTGCTGATGTGAAAAAGGATATGGAGACTCCGTTGCCTATGGATAGATTGATTTGTGGTGATGTTGGTTTCGGCAAGACTGAAGTAGCTGTTAGAGCAGCATTTAAAGCTGCAACAGACGGTAAGCAAGTTGCTGTGTTAGTGCCAACTACCGTATTGGCTTTGCAGCACTATCATACATTTAAAAACCGCCTCAATGATTTTCCTGTAACTGTCGAGTATTTAAGTCGCGCCCGTAGTACAAAACAAACAAAAGAGCTTCTTGAGAAATTAGAAAAAGGCGGAATCGACATAATTATCGGTACTCATAAATTAGTTAGTAAATCAGTTACATTCAAAGATTTAGGTCTGTTGATAATTGATGAAGAACAACGTTTTGGTGTGTCGGTAAAGGAAAAGCTAAAAGAAATCAAAGTTAATGTCGATACGTTGACTATGACTGCAACTCCCATACCCAGAACATTACAATTCTCGTTGTTAGGTGCAAGGGATTTGTCTATCATAAACACACCACCGCCAAATAGATTTCCTGTTCAAACAGAGATACATCCATTTGATGAAGATGTTATTCGCGAAGCTATTCAGATGGAAATGAACCGAAATGGTCAAGTCTTCTTTATCAACAACCGTATCCAGAATATTTATCAGATTGAAACGATGATAAAAAGATTAGTGCCAGGCGTGAGGGTAGCGGTAGGTCACGGACAAATGGCATCTGATAAGTTAGAAGAAATAATAGTTGATTTCATTGAATATGAGTATGATGTGCTGATAGCAACCACAATAATCGAGTCGGGTATTGATATTCCCAATGTTAATACAATAATAATTAATTCAGCACATAGATTTGGATTAAGCGATTTGCATCAATTAAGAGGTAGGGTAGGGCGAAGTAACAGAAAAGCATATTGTTACCTGTTGACGCCTGAATTAAGTTTGTTAACTCCCGATGCTCGTCGGCGACTATCTGCTATTGAAACTTTTTCGGAGCTTGGCAGCGGATTTAATATTGCAATGCAAGATTTGGATATCAGAGGTGCCGGAAATATGTTAGGTGCAGAGCAGAGCGGCTTTATAGCCGATTTAGGTTATGAAACTTACCAACGTATTTTGAATGAAGCAGTCCATGAGTTGAAAGATGAAGAGTTTTCAGAATTATATGTAGAAGAGATTGAGCAGGAAAATTCTTCGATAAATTATGTTACAGATTGTCACATAGATACAGATTTAGAATTGATGTTTCCATCTGATTATATAGAAAATGTATCGGAAAGGGTTGCATTGTACAGAGAGTTGGATAATATCGATAATGAGAATGATTTAAATGATTTTAGACAAAGACTTGAAGACCGTTTTGGTAAGCTTCCGGAGACTGTTAATGATTTGCTGCTTGTTGTTAAATTACGTCGATTAGCAATTAAGTATGGTGTTGATAAATTAGTTATCAAAAACGAAAAACTTATTGCGTATTTGGTAAGTAATCCGAATTCATCATATTATCAGTCAGAGAAATTTGGAAAAATACTTCAATTTATAGCTTTACATCCACGACAATGTCAGTTGCGCGACCAGCAAAACCGGCGTTCATTTGTTGTAAGCATGGTAAAATCAATAAATCAGGCTTATAATGTATTTGCAGAAATTGAAAAGCTAACAATCTAA
PROTEIN sequence
Length: 1112
LYSQHPQIIALNDWVNSNGKNVEISGLNGSAFSLMISSLYNKSLETSSKQHYILIMEDADEAAYTYHDIKNCIGEDDVFFFPSSYKKAIKLSQLDASNEILRTGVLNRLTNHKLPSIVVTYPEALFQKVVSAYGIQTFIIKLRKGESISIDFLSELLLEYGFSRVDFVYEPGQFSVRGGIVDIFSFSYELPYRFDFFGDEIDSIRIFDIESQLSKEQVEQVEIIPDLQKHKSVKQVSFFEFIDKNSILSFANTGFIKDKINQLYDDALIQANKGEDIIADLKDIRITGDDFLDQIDSFRKIITHDKTRIKADKRIEFKTSPQPIFHKNFDLISENLKKGMMDGYQLFIMSDSVKQTDRIDSIFKDRGDNIVFQAIKNTLHQGFIDHDMSFYCYTDHQIFDRFHKYRLRTDKTRQGKVVMTLKELNQFQLGDYMVHVDHGIGTFGGLVKTAVNGKMQEMVKLIYRDDDIIFVSIHSLHRISKYKGKEGEAPKINKLGSGAWERLKERTKSKVKDIARELIKLYAKRKAEQGFQFTPDSYMQQELEASFIYEDTPDQVKATADVKKDMETPLPMDRLICGDVGFGKTEVAVRAAFKAATDGKQVAVLVPTTVLALQHYHTFKNRLNDFPVTVEYLSRARSTKQTKELLEKLEKGGIDIIIGTHKLVSKSVTFKDLGLLIIDEEQRFGVSVKEKLKEIKVNVDTLTMTATPIPRTLQFSLLGARDLSIINTPPPNRFPVQTEIHPFDEDVIREAIQMEMNRNGQVFFINNRIQNIYQIETMIKRLVPGVRVAVGHGQMASDKLEEIIVDFIEYEYDVLIATTIIESGIDIPNVNTIIINSAHRFGLSDLHQLRGRVGRSNRKAYCYLLTPELSLLTPDARRRLSAIETFSELGSGFNIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQRILNEAVHELKDEEFSELYVEEIEQENSSINYVTDCHIDTDLELMFPSDYIENVSERVALYRELDNIDNENDLNDFRQRLEDRFGKLPETVNDLLLVVKLRRLAIKYGVDKLVIKNEKLIAYLVSNPNSSYYQSEKFGKILQFIALHPRQCQLRDQQNRRSFVVSMVKSINQAYNVFAEIEKLTI*