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SCNpilot_bf_inoc_scaffold_163_curated_81

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 95710..96465

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase a; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 247.0
  • Bit_score: 337
  • Evalue 4.50e-90
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 247.0
  • Bit_score: 337
  • Evalue 2.00e-89
tRNA pseudouridine synthase A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8J2_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 247.0
  • Bit_score: 337
  • Evalue 1.40e-89

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGCGCTATTTTATTTACTTTGCATATAACGGAACGAATTATAATGGTTGGCAAATTCAGCCTAATGGTATTGCAGTGCAGGAGGTTTTTACAAATGCACTGCAAACCTTTTTAAGAGAAAGTGTTGACGTTATAGCAGCCGGACGTACTGATTCCGGTGTTCATGCAAAGCAGATGGTAGCTCATTTTGATACTACTCGCGATGATTTGCAGTCAGATGAAGTTGTTCGCCGTTTGAATAGTATTTTGCCGAGAGATATTGCAGTTGATAAAATAATTAAGGTTCAACCAAATGCTCATGCCCGTTTTGATGCAATTTCGCGAACTTATGAATATCATGTTTATCAGGGTAAAAATGTATTTAAAGAAAACCTCGCTGTAAGATTATTTAATCCACTTGATTTTGATTTAATGAATATTGCAGCATCCAAATTGTTGGACTACACTGATTTTACAAGCTTTAGTAAACTTCATACTGATGTCAAGACTAACAACTGCATTGTGAAATACGCAAAATGGGAACAGCAGAATGATGAATGGGTATTTACTATTGAAGCCGATCGTTTTCTCCGAAATATGGTACGTTCAATTGTCGGAACTTTGTTTGATGTAGGTGCTCAAAAGATAAGTGTTGATGATTTCTGTAAAATTATTGAAGCCAAAGATCGCTGCAAAGCCGGCGTATCTGTCCCCGCACATGGATTATATCTCGTCAAAGTAGAGTATCCGGCAGAGATATTTTTAATGGCACACTGA
PROTEIN sequence
Length: 252
MRYFIYFAYNGTNYNGWQIQPNGIAVQEVFTNALQTFLRESVDVIAAGRTDSGVHAKQMVAHFDTTRDDLQSDEVVRRLNSILPRDIAVDKIIKVQPNAHARFDAISRTYEYHVYQGKNVFKENLAVRLFNPLDFDLMNIAASKLLDYTDFTSFSKLHTDVKTNNCIVKYAKWEQQNDEWVFTIEADRFLRNMVRSIVGTLFDVGAQKISVDDFCKIIEAKDRCKAGVSVPAHGLYLVKVEYPAEIFLMAH*