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SCNpilot_bf_inoc_scaffold_236_curated

Search features with annotation key words

Displaying items 31-60 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_236_curated_31
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(31209..32660)
DNA (1452bp) protein (484aa)
Putative uncharacterized protein id=1809755 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
mrdB; putative transmembrane rod shape-determining protein; K05837 rod shape determining protein RodA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32644..34566)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038186DD
penicillin-binding protein 2; K05515 penicillin-binding protein 2
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_33
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34559..35077)
DNA (519bp) protein (173aa)
Putative membrane protein {ECO:0000313|EMBL:CEA16074.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Rod shape-determining protein MreD id=1809751 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_34
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35077..35919)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380A4E3
Rod shape-determining protein MreC {ECO:0000313|EMBL:CEA16075.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
SCNpilot_bf_inoc_scaffold_236_curated_35
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35921..36946)
DNA (1026bp) protein (342aa)
MreB/Mrl family cell shape determining protein id=1809747 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
mbl; Mbl protein; K03569 rod shape-determining protein MreB and related proteins
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36993..38516)
DNA (1524bp) protein (508aa)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein purH id=1809745 bin=GWD2_Bacteroidales_45_23 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_37
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39250..39528
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUZ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03878.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transposase
SCNpilot_bf_inoc_scaffold_236_curated_38
unknown

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39633..40184
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_39
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40218..42170
DNA (1953bp) protein (651aa)
Beta-galactosidase trimerisation domain protein id=3703165 bin=GWF2_Bacteroidetes_42_66 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
beta-galactosidase trimerisation domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_40
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42194..44455
DNA (2262bp) protein (754aa)
Uncharacterized protein id=3163043 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_41
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

44456..46831
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMA1_9BACT
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_bf_inoc_scaffold_236_curated_42
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46869..48029
DNA (1161bp) protein (387aa)
Creatinase id=1751487 bin=GWE2_Bacteroidetes_42_39 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
M24 family peptidase
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_43
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48042..48785
DNA (744bp) protein (248aa)
Mlr8484 protein id=3703171 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_44
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48787..49734
DNA (948bp) protein (316aa)
id=1751484 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_45
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49748..50956
DNA (1209bp) protein (403aa)
Glucose/galactose transporter warning id=3703175 bin=GWF2_Bacteroidetes_42_66 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
glucose/galactose transporter
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_236_curated_46
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51223..52371)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EB8ED
transcriptional regulator; K02529 LacI family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52792..53754)
DNA (963bp) protein (321aa)
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2]
glucokinase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F4631
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54015..55463
DNA (1449bp) protein (483aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1]
Tryptophanase id=4136695 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_49
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55593..56069)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378548D
Uncharacterized protein {ECO:0000313|EMBL:CEA14669.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_50
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56120..57874)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D03F5
Uncharacterized protein {ECO:0000313|EMBL:CEA14667.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_51
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57897..61196)
DNA (3300bp) protein (1100aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003680854
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:CEA14665.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_52
unknown

Not on your lists

comp(61219..61323)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_53
unknown

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comp(61362..61742)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_54
unknown

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comp(61954..62043)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_55
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62327..63373)
DNA (1047bp) protein (349aa)
penicillin amidase (EC:3.5.1.11); K01442 choloylglycine hydrolase [EC:3.5.1.24]
choloylglycine hydrolase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371F182
Choloylglycine hydrolase {ECO:0000313|EMBL:GAE84162.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
SCNpilot_bf_inoc_scaffold_236_curated_56
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63614..65314)
DNA (1701bp) protein (567aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363F9AF
SCNpilot_bf_inoc_scaffold_236_curated_57
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65430..66539)
DNA (1110bp) protein (370aa)
TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:CEA16474.1}; EC=2.3.1.12 {ECO:0000313|EMBL:CEA16474.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003635687
SCNpilot_bf_inoc_scaffold_236_curated_58
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66581..67582)
DNA (1002bp) protein (334aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D456A
Acetoin dehydrogenase E1 component beta-subunit {ECO:0000313|EMBL:GAK37925.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
SCNpilot_bf_inoc_scaffold_236_curated_59
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67694..68689)
DNA (996bp) protein (332aa)
pyruvate dehydrogenase; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003762D53
Acetoin dehydrogenase E1 component alpha-subunit {ECO:0000313|EMBL:GAK37926.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
SCNpilot_bf_inoc_scaffold_236_curated_60
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68941..70677)
DNA (1737bp) protein (579aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Putative uncharacterized protein id=3951467 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 31-60 of 225 in total

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