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SCNpilot_bf_inoc_scaffold_236_curated

Search features with annotation key words

Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_236_curated_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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78..2222
DNA (2145bp) protein (715aa)
Alpha-galactosidase {ECO:0000313|EMBL:EEY81564.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EEY81564.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
glycoside hydrolase family protein; K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJH8_9BACE
SCNpilot_bf_inoc_scaffold_236_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2294..3238
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EB489
Uncharacterized protein {ECO:0000313|EMBL:CEA15684.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3235..4125
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378F359
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4144..4530)
DNA (387bp) protein (129aa)
HEPN domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P2_PALPW
hepn domain protein
HEPN domain protein {ECO:0000313|EMBL:ADQ80736.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4543..4857)
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P3_PALPW
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADQ80737.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4954..6219)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000365E549
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6355..9132
DNA (2778bp) protein (926aa)
Uncharacterized protein id=4756119 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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9155..10234
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CC72C
two-component system sensor rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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10410..11117
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036996DE
two component transcriptional regulator, LytTR family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_10
unknown

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comp(11114..11296)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_11
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11424..11918)
DNA (495bp) protein (165aa)
Appr-1-p processing domain protein id=4781900 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Appr-1-p processing protein
Tax=GWA2_Bacteroidetes_31_9b_curated
SCNpilot_bf_inoc_scaffold_236_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11930..12994)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003806C52
magnesium and cobalt transport protein cora; K03284 magnesium transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13108..15279)
DNA (2172bp) protein (724aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase large subunit id=4136679 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_14
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

Not on your lists

comp(15475..16377)
DNA (903bp) protein (301aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:EPT32790.1}; EC=2.5.1.74 {ECO:0000313|EMBL:EPT32790.1};; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C50FE
SCNpilot_bf_inoc_scaffold_236_curated_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16442..16795)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AFE31
S23 ribosomal protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_236_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16828..18726)
DNA (1899bp) protein (633aa)
methylmalonyl-CoA mutase small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D4015
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19141..20016
DNA (876bp) protein (292aa)
Xylanase id=1747118 bin=GWD2_Bacteroidales_45_23 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Esterase/lipase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_18
unknown

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comp(20013..20180)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_19
unknown

Not on your lists

comp(20143..20316)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20418..23192
DNA (2775bp) protein (925aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NT57_9SPHI
SCNpilot_bf_inoc_scaffold_236_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23215..23961)
DNA (747bp) protein (249aa)
Putative uncharacterized protein id=1809771 bin=GWD2_Bacteroidales_45_23 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
amidase rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_22
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(23968..25134)
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 id=4379204 bin=GWA2_Bacteroidetes_A19_40_15 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
major facilitator superfamily protein
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_bf_inoc_scaffold_236_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25150..26019)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=4136682 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26029..26367)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366D790
Uncharacterized protein {ECO:0000313|EMBL:CEA16069.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Nitrous oxide-stimulated promoter
SCNpilot_bf_inoc_scaffold_236_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26545..27234)
DNA (690bp) protein (230aa)
monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.1.-)
Monofunctional biosynthetic peptidoglycan transglycosylase id=1809765 bin=GWD2_Bacteroidales_45_23 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_26
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27231..27680)
DNA (450bp) protein (150aa)
Alanyl-tRNA synthetase n=1 Tax=Alistipes sp. CAG:831 RepID=R5I4S9_9BACT
Alanyl-tRNA synthetase {ECO:0000313|EMBL:CCY36980.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:831.;"
alanyl-tRNA synthetase
SCNpilot_bf_inoc_scaffold_236_curated_27
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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comp(27797..28414)
DNA (618bp) protein (206aa)
rubrerythrin id=4379372 bin=GWF2_Bacteroidetes_43_11 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
rubrerythrin
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_bf_inoc_scaffold_236_curated_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28452..28883)
DNA (432bp) protein (144aa)
hypothetical protein AtheD1_15457 id=4327229 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_236_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29058..30356)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein id=1809763 bin=GWD2_Bacteroidales_45_23 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30432..31199)
DNA (768bp) protein (256aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W1_PALPW
uba/thif-type nad/fad binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADQ79405.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 225 in total

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