ggKbase home page

SCNpilot_bf_inoc_scaffold_236_curated

Search features with annotation key words

Displaying items 121-150 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_236_curated_121
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(134986..136224)
DNA (1239bp) protein (413aa)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RAB4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CEA15685.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
O-acetylhomoserine sulfhydrylase rbh
SCNpilot_bf_inoc_scaffold_236_curated_122
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(136278..137528)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C809_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29856.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_236_curated_123
unknown

Not on your lists

comp(137586..137993)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036EA849
SCNpilot_bf_inoc_scaffold_236_curated_124
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138047..139309)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BE5A0
Uncharacterized protein {ECO:0000313|EMBL:AIZ40720.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_125
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

140169..140972
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003683745
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Polysaccharide export protein {ECO:0000313|EMBL:ADQ80450.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_126
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

141018..143405
DNA (2388bp) protein (796aa)
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family {ECO:0000313|EMBL:ADQ80451.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ADQ80451.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003722C57
SCNpilot_bf_inoc_scaffold_236_curated_127
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

143431..143859
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A4B95
WxcM-like domain-containing protein {ECO:0000313|EMBL:KIO46671.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
WxcM-like domain-containing protein
SCNpilot_bf_inoc_scaffold_236_curated_128
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

143837..144250
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RPG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA57691.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
WxcM-like domain-containing protein
SCNpilot_bf_inoc_scaffold_236_curated_129
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

144247..144798
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RNS2_9BACE
dTDP-6-deoxy-3,4-keto-hexulose isomerase {ECO:0000313|EMBL:KER52518.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
WxcM-like protein
SCNpilot_bf_inoc_scaffold_236_curated_130
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

144782..145885
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003652971
Uncharacterized protein {ECO:0000313|EMBL:EIY27951.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
aminotransferase rbh
SCNpilot_bf_inoc_scaffold_236_curated_131
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

145888..146592
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBE3_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53770.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_236_curated_132
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

146596..148086
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003821CEB
flippase rbh
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_236_curated_133
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

148093..149010
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ADDFD
Glycosyltransferase {ECO:0000313|EMBL:AHM61784.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_236_curated_134
Geobacillus sp. CAMR5420, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

149027..150313
DNA (1287bp) protein (429aa)
Glycosyl transferase group 1 n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPJ2_9FIRM
Glycosyl transferase family 1 {ECO:0000313|EMBL:KDE46143.1}; TaxID=1482739 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. CAMR5420.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_236_curated_135
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

150340..151698
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379AFB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80458.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_136
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

151646..152512
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003739FD2
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ80460.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_137
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

152519..153667
DNA (1149bp) protein (383aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6W8_PALPW
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ80462.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_138
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

153683..154795
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6X3_PALPW
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ80467.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_139
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

154814..155746
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000366D5C8
Uncharacterized protein {ECO:0000313|EMBL:GAF03239.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_140
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

155774..156529
DNA (756bp) protein (252aa)
glycosyl transferase, wecb/taga/cpsf family (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ADQ80468.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ADQ80468.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6X4_PALPW
SCNpilot_bf_inoc_scaffold_236_curated_141
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

156611..157993
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ADC4A
undecaprenyL-phosphate glucose phosphotransferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:ADQ80469.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_236_curated_142
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158040..159125
DNA (1086bp) protein (362aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CCE88
SCNpilot_bf_inoc_scaffold_236_curated_143
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159118..160209
DNA (1092bp) protein (364aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Nucleoside-diphosphate-sugar epimerases (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FD1DF
SCNpilot_bf_inoc_scaffold_236_curated_144
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

160191..160661
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038205F8
Uncharacterized protein {ECO:0000313|EMBL:CEA15641.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
N-acetyltransferase GCN5
SCNpilot_bf_inoc_scaffold_236_curated_145
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(160736..161689)
DNA (954bp) protein (318aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8A4_9FLAO
Phosphatidylinositol kinase {ECO:0000313|EMBL:KGO95655.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
SCNpilot_bf_inoc_scaffold_236_curated_146
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(161673..162008)
DNA (336bp) protein (112aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
phosphatidylinositol kinase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D31AAF
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_236_curated_147
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162005..162217)
DNA (213bp) protein (71aa)
XRE family transcriptional regulator n=1 Tax=Nafulsella turpanensis RepID=UPI00034B7E40
XRE family transcriptional regulator {ECO:0000313|EMBL:KIA89567.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
lambda repressor-like DNA-binding protein
SCNpilot_bf_inoc_scaffold_236_curated_148
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163129..163365)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CC83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ90729.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
Fic/DOC family.
SCNpilot_bf_inoc_scaffold_236_curated_149
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163380..163958)
DNA (579bp) protein (193aa)
cytochrome C biogenesis protein CycH n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000375FE94
Fic/DOC family protein
Fic/DOC family protein {ECO:0000313|EMBL:AFL78127.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
SCNpilot_bf_inoc_scaffold_236_curated_150
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(164169..164879)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPU0_SPILD
Uncharacterized protein {ECO:0000313|EMBL:KKB57976.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
Displaying items 121-150 of 225 in total

View Taxonomy