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SCNpilot_bf_inoc_scaffold_236_curated

Search features with annotation key words

Displaying items 181-210 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_236_curated_181
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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202588..203262
DNA (675bp) protein (225aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit id=2117771 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_bf_inoc_scaffold_236_curated_182
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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203283..204524
DNA (1242bp) protein (414aa)
ATP-dependent Clp protease ATP-binding subunit ClpX id=2117768 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_183
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

204837..207038
DNA (2202bp) protein (734aa)
ATP-dependent DNA helicase recQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003608665
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_184
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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207103..209064
DNA (1962bp) protein (654aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase id=2117764 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_185
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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209121..210458
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C8574
trkA; potassium transporter peripheral membrane protein; K03499 trk system potassium uptake protein TrkA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_186
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(210563..212065)
DNA (1503bp) protein (501aa)
Propionyl-CoA:succinate CoA transferase {ECO:0000313|EMBL:CEA16463.1}; EC=2.8.3.- {ECO:0000313|EMBL:CEA16463.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CB8DB
succinate CoA transferase
SCNpilot_bf_inoc_scaffold_236_curated_187
unknown

Not on your lists

comp(212107..212523)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_188
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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212855..214216
DNA (1362bp) protein (454aa)
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C41EB
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_189
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214319..214561
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FB631
Uncharacterized protein {ECO:0000313|EMBL:CEA16466.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_236_curated_190
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214592..214972
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826488
Putative membrane protein {ECO:0000313|EMBL:CEA16467.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_191
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214972..215352
DNA (381bp) protein (127aa)
id=1847135 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_192
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(215367..217715)
DNA (2349bp) protein (783aa)
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374A72D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_193
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

217949..220201
DNA (2253bp) protein (751aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B3892
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_194
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

220211..220777
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F1778
nicotinamide mononucleotide transporter; K03811 nicotinamide mononucleotide transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_195
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(220809..221162)
DNA (354bp) protein (118aa)
Transcriptional regulator id=4913144 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides sp. 3_1_23 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_196
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221505..221801
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V8B1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86823.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_197
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221814..222218
DNA (405bp) protein (135aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6V8C2_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC88301.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_198
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(222527..223609)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ82_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL72699.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_199
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

223719..226139
DNA (2421bp) protein (807aa)
MutS2 protein id=4756159 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
DNA mismatch repair protein MutS; K07456 DNA mismatch repair protein MutS2
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_200
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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226209..227585
DNA (1377bp) protein (459aa)
permease n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E756C
major facilitator superfamily mfs_1
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_201
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

227707..229761
DNA (2055bp) protein (685aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037598EB
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_202
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(229788..230399)
DNA (612bp) protein (204aa)
Putative oxygen regulatory protein NreC {ECO:0000313|EMBL:CEA15251.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative oxygen regulatory protein NreC id=3590868 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
putative oxygen regulatory protein NreC
SCNpilot_bf_inoc_scaffold_236_curated_203
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(230402..232324)
DNA (1923bp) protein (641aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15250.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein id=1934229 bin=GWD2_Bacteroidales_45_23 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein
SCNpilot_bf_inoc_scaffold_236_curated_204
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

232525..233091
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CDD80
Putative membrane protein {ECO:0000313|EMBL:CEA15249.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_205
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

233103..234395
DNA (1293bp) protein (431aa)
OmpA/MotB domain protein id=3590874 bin=GWC2_Bacteroidetes_46_850 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_206
unknown

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234556..235539
DNA (984bp) protein (328aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_236_curated_207
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

235649..236041
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003821EC8
Uncharacterized protein {ECO:0000313|EMBL:CEA15717.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_236_curated_208
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

236360..238297
DNA (1938bp) protein (646aa)
Uncharacterized protein id=4756127 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_209
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

238308..239528
DNA (1221bp) protein (407aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein ribBA id=1897833 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_236_curated_210
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239542..240864
DNA (1323bp) protein (441aa)
Putative uncharacterized protein id=1897830 bin=GWD2_Bacteroidales_45_23 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein; K09760 DNA recombination protein RmuC
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 181-210 of 225 in total

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