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SCNpilot_bf_inoc_scaffold_105_curated

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Displaying items 31-60 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_105_curated_31
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30879..31775)
DNA (897bp) protein (299aa)
Putative uncharacterized protein id=1957722 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:CEA16572.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ABC transporter
SCNpilot_bf_inoc_scaffold_105_curated_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31777..32673)
DNA (897bp) protein (299aa)
Uncharacterized protein id=2565714 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein; K01993 HlyD family secretion protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_33
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32696..33979)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=2565719 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
outer membrane efflux protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_34
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33976..34575)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family id=1957728 bin=GWD2_Bacteroidales_45_23 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TetR family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_35
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34719..35510
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CE490
Putative membrane protein {ECO:0000313|EMBL:CEA15800.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35790..36302
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003819F8E
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_37
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36616..37905
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CEDE6
Putative secreted protein {ECO:0000313|EMBL:CEA15797.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_38
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37931..39517
DNA (1587bp) protein (529aa)
Putative uncharacterized protein id=4369595 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
outer membrane insertion signal domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_39
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39817..43029
DNA (3213bp) protein (1071aa)
glutamine-dependent carbamyl phosphate synthetase; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
carbamoyl phosphate synthase large subunit n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D074B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43030..43782)
DNA (753bp) protein (251aa)
Putative uncharacterized protein id=4137032 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
putative tRNA/rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_41
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43949..45973
DNA (2025bp) protein (675aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372CBC1
SCNpilot_bf_inoc_scaffold_105_curated_42
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45985..46440
DNA (456bp) protein (152aa)
ribose 5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379FA2C
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_43
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46444..47469
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=4137022 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:CEA16118.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
peptidase S41
SCNpilot_bf_inoc_scaffold_105_curated_44
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47466..49115)
DNA (1650bp) protein (550aa)
amp-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase id=1996770 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_45
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49128..49694)
DNA (567bp) protein (189aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D5_PALPW
Transcriptional regulator {ECO:0000313|EMBL:CEA15668.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_105_curated_46
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50012..51976
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D7ED1
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
SCNpilot_bf_inoc_scaffold_105_curated_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52394..52717
DNA (324bp) protein (108aa)
Uncharacterized protein id=4805328 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52765..53445
DNA (681bp) protein (227aa)
membrane protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003765A46
lipoprotein PG3
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_49
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53647..54123
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003676993
GAF domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_50
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54663..55052)
DNA (390bp) protein (130aa)
Putative membrane protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UKE5_TANFA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEW21984.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_105_curated_51
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55221..56291
DNA (1071bp) protein (357aa)
Putative PHP domain protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KR63_9BACE
Putative PHP domain protein {ECO:0000313|EMBL:CDB72456.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_52
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56363..56617)
DNA (255bp) protein (85aa)
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_53
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56676..56873)
DNA (198bp) protein (66aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=K6AS61_9PORP
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDB49288.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
helix-turn-helix domain-containing protein
SCNpilot_bf_inoc_scaffold_105_curated_54
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57029..58609
DNA (1581bp) protein (527aa)
YjeF-like protein, hydroxyethylthiazole kinase-related {ECO:0000313|EMBL:CEA15567.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
YjeF-related protein id=1934325 bin=GWD2_Bacteroidales_45_23 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
YjeF-like protein
SCNpilot_bf_inoc_scaffold_105_curated_55
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


58698..59057
DNA (360bp) protein (120aa)
50S ribosomal protein L21 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372D1E6
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_56
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


59078..59347
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZG9_9PORP
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_bf_inoc_scaffold_105_curated_57
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59403..60647
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FD625
hypothetical protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_58
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60642..61466)
DNA (825bp) protein (275aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
orotidine 5''''-phosphate decarboxylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E2490
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_59
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61490..62575)
DNA (1086bp) protein (362aa)
peptide chain release factor 1 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DB536
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
SCNpilot_bf_inoc_scaffold_105_curated_60
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62589..63764)
DNA (1176bp) protein (392aa)
phosphoribosylformylglycinamidine cyclO-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381A5E5
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 31-60 of 127 in total

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