ggKbase home page

SCNpilot_bf_inoc_scaffold_105_curated

Search features with annotation key words

Displaying items 91-120 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_105_curated_91
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104080..104856)
DNA (777bp) protein (259aa)
AMP nucleosidase (EC:3.2.2.4); K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase id=1823112 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_92
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104906..105355
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15794.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=4369590 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_93
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(105367..106749)
DNA (1383bp) protein (461aa)
Uncharacterized protein id=1934219 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class)
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_94
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106851..107225
DNA (375bp) protein (125aa)
putative folic acid related biosynthesis protein (fragment); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase id=3590862 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_95
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(107219..109426)
DNA (2208bp) protein (736aa)
GTP pyrophosphokinase; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
Putative uncharacterized protein id=3590863 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_96
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

109610..112168
DNA (2559bp) protein (853aa)
bmnA; beta-mannosidase; K01192 beta-mannosidase [EC:3.2.1.25]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E1719
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_97
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

112277..113500
DNA (1224bp) protein (408aa)
L-serine dehydratase; K01752 L-serine dehydratase [EC:4.3.1.17] rbh
serine dehydratase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F49B2
L-serine dehydratase, iron-sulfur-dependent,single chain form {ECO:0000313|EMBL:CEA15196.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_105_curated_98
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113511..114896)
DNA (1386bp) protein (462aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15833.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=1897859 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
secreted glycosylhydrolase
SCNpilot_bf_inoc_scaffold_105_curated_99
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114907..115914)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381EE20
Putative membrane protein {ECO:0000313|EMBL:CEA15832.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_100
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115919..116467)
DNA (549bp) protein (183aa)
AraC family transcriptional regulator; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Flexithrix dorotheae RepID=UPI00036E4E67
Methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:KES18664.1}; TaxID=1445514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-I20.;"
SCNpilot_bf_inoc_scaffold_105_curated_101
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(116475..117488)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363E744
thiamine biosynthesis lipoprotein ApbE; K03734 thiamine biosynthesis lipoprotein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_102
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(117490..118440)
DNA (951bp) protein (317aa)
Putative uncharacterized protein id=4756166 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
family 2 glycosyl transferase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_103
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(118465..118992)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=4756165 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_104
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

119257..119832
DNA (576bp) protein (192aa)
Redoxin domain-containing protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WDB2_9FLAO
Redoxin domain-containing protein {ECO:0000313|EMBL:EID74378.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
redoxin domain-containing protein
SCNpilot_bf_inoc_scaffold_105_curated_105
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(119843..120814)
DNA (972bp) protein (324aa)
Oxidoreductase domain protein id=4137003 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
GFO/IDH/MocA family oxidoreductase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_106
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(120824..123265)
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003755C5A
Cytochrome c biogenesis protein {ECO:0000313|EMBL:CDB47230.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
cytochrome c biogenesis protein
SCNpilot_bf_inoc_scaffold_105_curated_107
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(123541..124464)
DNA (924bp) protein (308aa)
sugar phosphate isomerase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035FFF06
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_108
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(124476..125855)
DNA (1380bp) protein (460aa)
Dehydrogenase, putative exo-alpha-sialidase id=4137009 bin=GWC2_Bacteroidetes_46_850 species=Parabacteroides distasonis genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
dehydrogenase exo-alpha-sialidase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_109
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(125882..127474)
DNA (1593bp) protein (531aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA16116.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Uncharacterized protein id=4137011 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_110
unknown

Not on your lists

127629..127751
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_105_curated_111
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

127815..129470
DNA (1656bp) protein (552aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003700FB7
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_112
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(129500..130192)
DNA (693bp) protein (231aa)
NUDIX hydrolase id=2117799 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
nudix hydrolase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_113
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(130282..131430)
DNA (1149bp) protein (383aa)
galactokinase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003664A1F
galactokinase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_114
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131452..132759)
DNA (1308bp) protein (436aa)
Uncharacterized protein id=2117795 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
glucose/galactose transporter rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_115
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(132783..133880)
DNA (1098bp) protein (366aa)
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase id=2117793 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_116
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(134140..135423)
DNA (1284bp) protein (428aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15865.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
CBS domain-containing protein id=2117791 bin=GWD2_Bacteroidales_45_23 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_117
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135429..136331)
DNA (903bp) protein (301aa)
nucleotidyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003780849
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_118
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(136404..137090)
DNA (687bp) protein (229aa)
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
ribosomal large subunit pseudouridine synthase D n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D58C8
Uncharacterized protein {ECO:0000313|EMBL:CEA15869.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_105_curated_119
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(137099..137845)
DNA (747bp) protein (249aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-ACP synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E44CF
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_120
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(137882..138511)
DNA (630bp) protein (210aa)
Putative uncharacterized protein id=2117783 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 91-120 of 127 in total

View Taxonomy