ggKbase home page

SCNpilot_bf_inoc_scaffold_105_curated

Search features with annotation key words

Displaying items 61-90 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_105_curated_61
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63973..65244)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein id=1823044 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_62
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(65348..67894)
DNA (2547bp) protein (849aa)
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E06F8
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_63
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68168..71464)
DNA (3297bp) protein (1099aa)
preprotein translocase subunit SecA n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F65C8
secA; Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_64
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71551..73119)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037692C4
alkaline phosphatase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_65
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73157..74404)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003631B1D
Uncharacterized protein {ECO:0000313|EMBL:CEA15773.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_66
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(74575..74829)
DNA (255bp) protein (85aa)
50S ribosomal protein L31 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C08BA
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
rpmE; 50S ribosomal protein L31
SCNpilot_bf_inoc_scaffold_105_curated_67
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

75025..76269
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CAE97
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
competence/damage-inducible protein cina; K03742 competence/damage-inducible protein CinA
SCNpilot_bf_inoc_scaffold_105_curated_68
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

76366..76809
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TND4_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR20391.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_bf_inoc_scaffold_105_curated_69
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

76965..77555
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Holliday junction DNA helicase subunit RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003656EDF
SCNpilot_bf_inoc_scaffold_105_curated_70
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

77646..84665
DNA (7020bp) protein (2340aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003823B91
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_71
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84733..85350
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003702EC2
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU05295.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_bf_inoc_scaffold_105_curated_72
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

85417..86466
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380971E
Uncharacterized protein {ECO:0000313|EMBL:EOR95234.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
FecR protein
SCNpilot_bf_inoc_scaffold_105_curated_73
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

86506..89139
DNA (2634bp) protein (878aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372A574
Uncharacterized protein {ECO:0000313|EMBL:CDE62650.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_74
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89446..90135)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380D973
ATP-binding protein involved in cell division; K09812 cell division transport system ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_75
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90135..90602)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003707651
hypothetical protein; K09940 hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_76
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90666..91229)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EA1F1
Uncharacterized protein {ECO:0000313|EMBL:CEA16024.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_77
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(91290..91697)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003697046
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_78
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

91893..93578
DNA (1686bp) protein (562aa)
C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A (EC:3.4.21.102)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003602006
Uncharacterized protein {ECO:0000313|EMBL:CEA16026.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_105_curated_79
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

93584..94648
DNA (1065bp) protein (355aa)
Putative uncharacterized protein id=4805335 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
capsule biosynthesis protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_80
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

94652..95104
DNA (453bp) protein (151aa)
Mg(2+) transport protein C, mgtC family protein id=1939387 bin=GWD2_Bacteroidales_45_23 species=Galbibacter marinus genus=Galbibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Mg(2+) transport protein C, mgtC family protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_81
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95107..95928)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F60F3
Uncharacterized protein {ECO:0000313|EMBL:CEA16028.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_82
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95966..96628)
DNA (663bp) protein (221aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
uracil-DNA glycosylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F23C5
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_83
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(96777..97844)
DNA (1068bp) protein (356aa)
asparagine synthetase AsnA (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1]
Aspartate--ammonia ligase id=4369581 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_84
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97933..98844)
DNA (912bp) protein (304aa)
dihydroorotate dehydrogenase 1B; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase id=4369582 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_85
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98832..99605)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003714F73
putative dihydroorotate oxidase, electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_86
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(99653..101020)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371E847
Amino acid permease {ECO:0000313|EMBL:CEA15789.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
amino acid permease
SCNpilot_bf_inoc_scaffold_105_curated_87
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(101137..101595)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003671170
Uncharacterized protein {ECO:0000313|EMBL:CEA15790.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_105_curated_88
unknown

Not on your lists

101961..102188
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_105_curated_89
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

102515..103045
DNA (531bp) protein (177aa)
Glutathione peroxidase (EC:1.11.1.9)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037772C3
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_105_curated_90
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(103042..104058)
DNA (1017bp) protein (339aa)
hypothetical protein; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D721F
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 61-90 of 127 in total

View Taxonomy