ggKbase home page

SCNpilot_bf_inoc_scaffold_217_curated

Search features with annotation key words

Displaying items 1-30 of 396 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_217_curated_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CEA14961.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CEA14961.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
putative ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D3A2A
SCNpilot_bf_inoc_scaffold_217_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

489..914
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361FFA2
glycosyltransferase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_3
unknown

Not on your lists

987..1184
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_217_curated_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1277..1813
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DB73F
Uncharacterized protein {ECO:0000313|EMBL:CEA16842.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
tRNA/rRNA methyltransferase (SpoU)
SCNpilot_bf_inoc_scaffold_217_curated_5
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1899..2234
DNA (336bp) protein (112aa)
DNA polymerase beta domain protein region id=4652876 bin=GWF2_Bacteroidetes_40_14 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein; K07075
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_217_curated_6
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2203..2556
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=4652877 bin=GWF2_Bacteroidetes_40_14 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_217_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2558..3301)
DNA (744bp) protein (248aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003635812
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3336..3653)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368DAF6
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3703..4392)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003605025
DNA repair protein RadC; K03630 DNA repair protein RadC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_10
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4584..5345)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038103FD
hypothetical protein; K09861 hypothetical protein
UPF0246 protein TFKS16_2987 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SCNpilot_bf_inoc_scaffold_217_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5359..6486)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037BC414
ATPase
Putative ATPase {ECO:0000313|EMBL:ADQ80412.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_217_curated_12
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6617..7279)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003614BC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF51930.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_bf_inoc_scaffold_217_curated_13
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7300..7866)
DNA (567bp) protein (189aa)
elongation factor P n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037033FB
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
efp-2; elongation factor P; K02356 elongation factor P rbh
SCNpilot_bf_inoc_scaffold_217_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7955..9265)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361AC93
permease
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9284..10009)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CBA6F
Uncharacterized protein {ECO:0000313|EMBL:CEA16851.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_16
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10497..11975
DNA (1479bp) protein (493aa)
cysteinyL-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
cysteinyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003642F44
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11956..12672
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826B86
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12669..13310
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826B86
SNF family Na+-dependent transporter
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13535..14764
DNA (1230bp) protein (410aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037ADEBC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_20
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14770..15204
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003613E18
Putative membrane protein {ECO:0000313|EMBL:CEA16855.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15496..16026
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B09EC
zinc ABC transporter permease; K09816 zinc transport system permease protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_22
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16085..17353
DNA (1269bp) protein (423aa)
Putative uncharacterized protein id=4388455 bin=GWF2_Bacteroidetes_40_14 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein; K07133
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_217_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17467..19545
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003754DEA
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19542..20123
DNA (582bp) protein (194aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclass
deoxyribonucleoside-triphosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361598E
SCNpilot_bf_inoc_scaffold_217_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20212..21273
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B69B7
oxidoreductase domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_26
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21334..21609)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003693BA4
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:EOA54692.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
Txe/YoeB family addiction module toxin
SCNpilot_bf_inoc_scaffold_217_curated_27
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21606..21863)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826496
Uncharacterized protein {ECO:0000313|EMBL:EOA54693.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
SCNpilot_bf_inoc_scaffold_217_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21988..22206
DNA (219bp) protein (73aa)
Uncharacterized protein id=2095276 bin=GWD2_Bacteroidales_45_23 species=Parabacteroides merdae genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22301..22543
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC96_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY51693.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_bf_inoc_scaffold_217_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22797..23681)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382CFE0
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 396 in total

View Taxonomy