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SCNpilot_bf_inoc_scaffold_217_curated

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Displaying items 121-150 of 396 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_217_curated_121
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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131632..132264
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036068F8
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_122
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

132410..133648
DNA (1239bp) protein (413aa)
Ornithine aminotransferase, mitochondrial {ECO:0000313|EMBL:CEA16887.1}; EC=2.6.1.13 {ECO:0000313|EMBL:CEA16887.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ornithine aminotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360448B
ornithine aminotransferase
SCNpilot_bf_inoc_scaffold_217_curated_123
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

133746..134648
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369852D
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_124
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

134746..135162
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D0B92
mscL; large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_217_curated_125
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135164..135931)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375FD80
DNA metabolism protein {ECO:0000313|EMBL:KGN74484.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_126
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(135928..138375)
DNA (2448bp) protein (816aa)
beta-galactosidase; K01190 beta-galactosidase [EC:3.2.1.23] rbh
beta-galactosidase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F0E1C
Uncharacterized protein {ECO:0000313|EMBL:EGK01966.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_217_curated_127
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(138454..139533)
DNA (1080bp) protein (360aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89); K01224 arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DSN8_9BACE
SCNpilot_bf_inoc_scaffold_217_curated_128
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(139554..141257)
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003803380
Uncharacterized protein {ECO:0000313|EMBL:EOA52292.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
putative lipoprotein
SCNpilot_bf_inoc_scaffold_217_curated_129
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(141280..142854)
DNA (1575bp) protein (525aa)
SusD family protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NMA8_9BACE
SusD family protein {ECO:0000313|EMBL:EEF86945.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
SusD family protein
SCNpilot_bf_inoc_scaffold_217_curated_130
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(143187..145919)
DNA (2733bp) protein (911aa)
collagen-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372BCB4
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEF86946.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_217_curated_131
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(145971..148538)
DNA (2568bp) protein (856aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372575A
Uncharacterized protein {ECO:0000313|EMBL:EEF86947.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_132
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148769..149251)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CE0ED
Uncharacterized protein {ECO:0000313|EMBL:EGK03237.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
gcn5-related N-acetyltransferase
SCNpilot_bf_inoc_scaffold_217_curated_133
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(149244..150800)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03238.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Nif-specific regulatory protein; K02584 Nif-specific regulatory protein
SCNpilot_bf_inoc_scaffold_217_curated_134
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(151031..152614)
DNA (1584bp) protein (528aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03238.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Nif-specific regulatory protein; K02584 Nif-specific regulatory protein
SCNpilot_bf_inoc_scaffold_217_curated_135
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(152942..154069)
DNA (1128bp) protein (376aa)
pyruvate carboxyltransferase; K02594 homocitrate synthase NifV [EC:2.3.3.14]
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003745F77
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ABR49642.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_217_curated_136
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(154114..155376)
DNA (1263bp) protein (421aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU62_9PORP
Nitrogenase cofactor biosynthesis protein NifB {ECO:0000313|EMBL:EGK03241.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
nitrogenase molybdenum-cofactor biosynthesis protein NifB; K02585 nitrogen fixation protein NifB
SCNpilot_bf_inoc_scaffold_217_curated_137
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(155441..156088)
DNA (648bp) protein (216aa)
Fe-only nitrogenase accessory protein AnfO n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTU4_CHLT3
Fe-only nitrogenase accessory protein AnfO
Fe-only nitrogenase accessory protein AnfO {ECO:0000313|EMBL:ACF14292.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
SCNpilot_bf_inoc_scaffold_217_curated_138
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(156192..156683)
DNA (492bp) protein (164aa)
Putative flavin-nucleotide-binding protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B4G5_9BACT
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:EIQ02157.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
nitroimidazole resistance protein; K07005
SCNpilot_bf_inoc_scaffold_217_curated_139
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(156716..157135)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000367D420
Uncharacterized protein {ECO:0000313|EMBL:AIQ57940.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_140
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(157150..158541)
DNA (1392bp) protein (464aa)
Fe-only nitrogenase fefe protein subunit anfk (EC:1.18.6.1); K02591 nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
Fe-only nitrogenase FeFe protein subunit AnfK {ECO:0000313|EMBL:ADQ79507.1}; EC=1.18.6.1 {ECO:0000313|EMBL:ADQ79507.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Fe-only nitrogenase FeFe protein subunit AnfK n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T463_PALPW
SCNpilot_bf_inoc_scaffold_217_curated_141

Not on your lists

comp(158603..158959)
DNA (357bp) protein (119aa)
Fe-only nitrogenase subunit delta; K00531 nitrogenase [EC:1.18.6.1]
Dinitrogenase delta subunit n=1 Tax=nitrogen fixing bacterium ANFK33 RepID=Q9S0V2_9BACT
Dinitrogenase delta subunit {ECO:0000313|EMBL:BAA86282.1}; TaxID=96027 species="Bacteria.;" source="nitrogen fixing bacterium ANFK33.;"
SCNpilot_bf_inoc_scaffold_217_curated_142

Not on your lists

comp(158979..160595)
DNA (1617bp) protein (539aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=96027 species="Bacteria.;" source="nitrogen fixing bacterium ANFK33.;"
Fe-only nitrogenase fefe protein subunit anfd (EC:1.18.6.1); K02586 nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
Nitrogenase protein alpha chain n=1 Tax=nitrogen fixing bacterium ANFK33 RepID=Q9S0V3_9BACT
SCNpilot_bf_inoc_scaffold_217_curated_143
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160622..160993)
DNA (372bp) protein (124aa)
Nitrogen regulatory protein P-II n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T466_PALPW
nitrogen regulatory protein p-ii; K02590 nitrogen regulatory protein PII 2
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADQ79510.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_217_curated_144

Not on your lists

comp(161005..161322)
DNA (318bp) protein (106aa)
GlnB-like protein n=1 Tax=nitrogen fixing bacterium ANFK33 RepID=Q9S0V5_9BACT
GlnB-like protein {ECO:0000313|EMBL:BAA86279.1}; TaxID=96027 species="Bacteria.;" source="nitrogen fixing bacterium ANFK33.;"
nitrogen regulatory protein p-ii; K02589 nitrogen regulatory protein PII 1
SCNpilot_bf_inoc_scaffold_217_curated_145
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(161361..162185)
DNA (825bp) protein (275aa)
nitrogenase iron protein (EC:1.18.6.1); K02588 nitrogenase iron protein NifH [EC:1.18.6.1]
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Nitrogenase iron protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T468_PALPW
SCNpilot_bf_inoc_scaffold_217_curated_146
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162550..166482)
DNA (3933bp) protein (1311aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003825D23
Uncharacterized protein {ECO:0000313|EMBL:CCY86914.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
two-component system sensor histidine kinase rbh
SCNpilot_bf_inoc_scaffold_217_curated_147
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(166498..167760)
DNA (1263bp) protein (421aa)
biotin synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DCE05
Radical SAM protein {ECO:0000313|EMBL:KGN79699.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
putative DNA modification/repair radical SAM protein
SCNpilot_bf_inoc_scaffold_217_curated_148
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

167969..168367
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DE031
Putative membrane protein {ECO:0000313|EMBL:CEA16890.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_217_curated_149
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168378..168950
DNA (573bp) protein (191aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
RNA polymerase sigma factor id=3869824 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_217_curated_150
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168965..169339
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376D7AD
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 121-150 of 396 in total

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