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SCNpilot_bf_inoc_scaffold_217_curated_149

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 168378..168950

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 184.0
  • Bit_score: 279
  • Evalue 3.80e-72
RNA polymerase sigma factor id=3869824 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 183.0
  • Bit_score: 261
  • Evalue 7.60e-67
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 175.0
  • Bit_score: 166
  • Evalue 1.00e-38

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Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGACGAACAATTGTATGTGAAGCAGATACTCTCTGGCAATACTTCCGTGTTCAGCTACTTTGTCGAAACATACCAGGAAATGGCGATCACCATCGCCTACCGGATTTGCGGCAACCAGCAGGACGCGGAAGATGTCGTGCAGGAAAGTTTCGTGAAGGCATACCGCAATCTACATGGTTTCCGCGCCGACAGTAAGTTTTCGACATGGTTCTACCGTATTGTGTATAATACAGCGGTTACACTCACGAAATCGAAAATGTGGACCGGTTATAATGAAACAGATATAGAAAACGCATCCCATTTATCCGGCAACTCCGTAGACAGCAACATAGAGGATATTGAACAAAAAGAAATGGTAGGGGATATCCTGCAAAAAATGCCCAAAGGCGATGCTTTACTGCTTACGCTATACTATTTGGAAGATAATCCGGTCAAGGAGATCGCAAAAATAACAGGGTTGAACGAAACCAATGTGAAAGTGAAAATGTTCAGGGCAAGAAAGTTATTCAAGGAAATGCTCATTCGATATTACGGGCAAACCGTCGAGGATCAATTCTTAGTGTCTTTCTAA
PROTEIN sequence
Length: 191
MDEQLYVKQILSGNTSVFSYFVETYQEMAITIAYRICGNQQDAEDVVQESFVKAYRNLHGFRADSKFSTWFYRIVYNTAVTLTKSKMWTGYNETDIENASHLSGNSVDSNIEDIEQKEMVGDILQKMPKGDALLLTLYYLEDNPVKEIAKITGLNETNVKVKMFRARKLFKEMLIRYYGQTVEDQFLVSF*