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SCNpilot_bf_inoc_scaffold_600_curated_33

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 42281..43159

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Parabacteroides RepID=E1Z120_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 293.0
  • Bit_score: 252
  • Evalue 7.10e-64
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFK60449.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 293.0
  • Bit_score: 252
  • Evalue 9.90e-64
anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 296.0
  • Bit_score: 245
  • Evalue 2.70e-62

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Taxonomy

Parabacteroides sp. 20_3 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 879
ATGAAAGAAAGAACAAAAAAAATTGCGGAGGATAGCTTTGCGAGTGAAGTAAATCTTAAAAATGAATGGAATCGTCTGTTGGGATCTATTCAAAAAGAAAATAAGCCTGTGGGTAAGACAAGAATCATTGGCAAATATTTACAGATGGCTGCCGGATATGCGGCTGCCGTTTTAGTGGGAGCTGCTCTTGTTTTCGTTTTTACACATACAAGAACATTGCCAGAGCAGGTTCAAGGTGGTAGTTTTATCGTTCAGACAGATAATTCCGATAGATCTTTTACCCAATTACCGGATGGATCCAGGATATGGCTCAACAAAGGAACGAAGATAGAATATAATCAGCAGTTCGGCATTGGAAACAGAAATGTGTTGCTAAACGGAGAAGCCTATTTTGAGGTTGCTAAAAACAAGAAGCTTGCATTTGTAGTGAAAACAAAATCAATTGATGTTACCGCTCTGGGAACTAGCTTCAATGTGAATGCCTACGATGACGGGAATGAAGTCACGACAACATTATATACGGGGAAAGTGAACGTACAGTCTACATTGACAGGATATAAAACAATCCTGAATCCCTTTGAAGTAGCGGTGTTTAGCAAAACAAAGGATAAAATCACGACGTATGTATTTACCGGACCAGATAAACCTGTATGGATGGAGCCGGAATTCAGGTTCGATATGCTCCCTCTTATTGATATTACCAAGCAGTTGGAGCATAATTATAATGTCGTTTTTGTTTATAGAAATCAAAAAATCAAGCATTTGAAGTTTAGTGGTACTTTTGATCGCGACGAGAAGCTGGATGAGATATTAAGAGTAATAAAAATCAATACTAACATTGACTATGCAATAAAGAATGATAGTGTAATTATAAAATAA
PROTEIN sequence
Length: 293
MKERTKKIAEDSFASEVNLKNEWNRLLGSIQKENKPVGKTRIIGKYLQMAAGYAAAVLVGAALVFVFTHTRTLPEQVQGGSFIVQTDNSDRSFTQLPDGSRIWLNKGTKIEYNQQFGIGNRNVLLNGEAYFEVAKNKKLAFVVKTKSIDVTALGTSFNVNAYDDGNEVTTTLYTGKVNVQSTLTGYKTILNPFEVAVFSKTKDKITTYVFTGPDKPVWMEPEFRFDMLPLIDITKQLEHNYNVVFVYRNQKIKHLKFSGTFDRDEKLDEILRVIKINTNIDYAIKNDSVIIK*