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SCNpilot_bf_inoc_scaffold_797_curated

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Displaying items 31-60 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_797_curated_31
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25227..27770
DNA (2544bp) protein (848aa)
RecB family exonuclease-like protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8E2_ACISJ
exonuclease-like protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_797_curated_32
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27919..31230
DNA (3312bp) protein (1104aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
UvrD/REP helicase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MI32_ACIET
uvrd/rep helicase
SCNpilot_bf_inoc_scaffold_797_curated_33
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31562..32368)
DNA (807bp) protein (269aa)
cell division protein Fic n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C0A72
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABR64684.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_bf_inoc_scaffold_797_curated_34
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32368..32652)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IFE3_LEGPC
Cell division protein Fic {ECO:0000313|EMBL:KEQ03489.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_797_curated_35
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32919..33821
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU36_ALIDB
ABC transporter substrate-binding protein; K10005 glutamate transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO22036.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_797_curated_36
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33835..34497
DNA (663bp) protein (221aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8C5_ALIDK
polar amino acid ABC transporter permease; K10006 glutamate transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEB85584.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_797_curated_37
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34494..35294
DNA (801bp) protein (267aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TU38_ALIDB
polar amino acid ABC transporter permease; K10007 glutamate transport system permease protein
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:GAO22034.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_797_curated_38
unknown

Not on your lists

comp(35246..35374)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_797_curated_39
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35387..36724
DNA (1338bp) protein (446aa)
Uncharacterized protein id=1265361 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative flavoprotein
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_bf_inoc_scaffold_797_curated_40
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36738..37307)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK5_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31652.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_797_curated_41
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37344..38900)
DNA (1557bp) protein (519aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK4_ACIET
erfk/ybis/ycfs/ynhg family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACM31651.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_797_curated_42
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38946..40418)
DNA (1473bp) protein (491aa)
succinate semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
succinate-semialdehyde dehdyrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037283B1
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL90102.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
SCNpilot_bf_inoc_scaffold_797_curated_43
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40537..41202
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T662_ACIDE
Regulator {ECO:0000313|EMBL:KJA09707.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_bf_inoc_scaffold_797_curated_44
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41207..42583
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T661_ACIDE
two component transcriptional regulator, sensor histidine kinase
SCNpilot_bf_inoc_scaffold_797_curated_45
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43007..43495
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003609C93
IPTL-CTERM sorting domain protein {ECO:0000313|EMBL:KFJ09712.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
fibronectin type III
SCNpilot_bf_inoc_scaffold_797_curated_46
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43917..44768)
DNA (852bp) protein (284aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364C73F
Uncharacterized protein {ECO:0000313|EMBL:GAD22372.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09933 hypothetical protein
SCNpilot_bf_inoc_scaffold_797_curated_47
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44784..45569)
DNA (786bp) protein (262aa)
UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003642C98
SCNpilot_bf_inoc_scaffold_797_curated_48
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45590..46099)
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E2_ACIDE
SCNpilot_bf_inoc_scaffold_797_curated_49
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46133..46813)
DNA (681bp) protein (227aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129L0_POLSJ
Peptidyl-prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:ABE44782.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_bf_inoc_scaffold_797_curated_50
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46901..47413)
DNA (513bp) protein (171aa)
Candidate TPR domain protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4X4_RAMTT
TPR domain-containing protein
Candidate TPR domain protein {ECO:0000313|EMBL:AEG92630.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_797_curated_51
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47703..49079
DNA (1377bp) protein (459aa)
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Cysteine--tRNA ligase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4X5_RAMTT
SCNpilot_bf_inoc_scaffold_797_curated_52
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49152..49775
DNA (624bp) protein (208aa)
alkA; DNA glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Candidate DNA glycosylase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4X6_RAMTT
Candidate DNA glycosylase {ECO:0000313|EMBL:AEG92632.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_797_curated_53
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49828..50799
DNA (972bp) protein (324aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TZX7_ALIDB
SCNpilot_bf_inoc_scaffold_797_curated_54
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50910..51203)
DNA (294bp) protein (98aa)
Voltage-gated potassium channel protein SHAB n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IVP3_COMT2
Voltage-gated potassium channel protein SHAB
Voltage-gated potassium channel protein SHAB {ECO:0000313|EMBL:KGH15191.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_bf_inoc_scaffold_797_curated_55
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51367..51936
DNA (570bp) protein (190aa)
polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Acidovorax radicis RepID=UPI0002377BB2
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EJE50147.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
polyhydroxyalkonate synthesis repressor PhaR
SCNpilot_bf_inoc_scaffold_797_curated_56
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51974..53392
DNA (1419bp) protein (473aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1144318 species="Bacteria; Pr
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Polaromonas sp. CF318 RepID=J2L178_9BURK
SCNpilot_bf_inoc_scaffold_797_curated_57
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53673..55916
DNA (2244bp) protein (748aa)
rnr; exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
ribonuclease R n=1 Tax=Variovorax paradoxus RepID=UPI000363370F
SCNpilot_bf_inoc_scaffold_797_curated_58
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56010..56837)
DNA (828bp) protein (276aa)
tctA; putative tricarboxylate transport protein TctA id=5080152 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
tctA; tricarboxylate transport protein TctA
Tax=CG_Rhodof_03
SCNpilot_bf_inoc_scaffold_797_curated_59
unknown

Not on your lists

56988..57170
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_797_curated_60
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57470..57916)
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=1262713 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
Displaying items 31-60 of 130 in total

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