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SCNpilot_bf_inoc_scaffold_797_curated_57

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 53673..55916

Top 3 Functional Annotations

Value Algorithm Source
rnr; exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 750.0
  • Bit_score: 1150
  • Evalue 0.0
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 750.0
  • Bit_score: 1150
  • Evalue 0.0
ribonuclease R n=1 Tax=Variovorax paradoxus RepID=UPI000363370F similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 762.0
  • Bit_score: 1152
  • Evalue 0.0

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
GTGCAAGGCCACCGCGACGGGCACGGTTTCGTGCTGCGCGACGACGGCGACGCCGACATCTATCTGCCCCCCAACGAGATGCGCGCGGTGCTGCACCGCGACCGCGTGCGCGTGCGCATCGCGCGGCAGGACCGGCGCGGGCGCCCCGAGGGGCGCGTGCTCGAAATCGTCGAGCGCCCGCCGCAGCCCATCATCGGCCGCCTGCTGCACGAAGCCGGCATCTGGCTGGTGGCGCCGGAAGACCGGCGCTACGGCCAGGATGTGCTGATCCCCAAGGCCGCCATCGGCGCCGCCCGGCCGGGGCAGGTGGTGGTGGTCGAGCTGACCGAGCCGCCGGCGCTCTACGGCCAGCCGGTTGGCCGCGTCAAGGAAGTGCTGGGCGAGATCGACGACCCCGGCATGGAAATTGAAATCGCGGTGCGCAAGTACGGCGTGCCGCACGAGTTCTCCGACGCCGCCATCGGCGAGGCGCGCGCCCTGCCCGACAGCGTGCAGCCGCGCGACCGCGCCGGCCGCGTCGACCTGACCGACGTGCCGCTGGTCACCATCGACGGCGAGGACGCGCGCGACTTCGACGACGCGGTGTACTGCCAGCCCGCCGTGGTCACCGGCCGCGGCAAGAAACCCAACGGCTGGCGCCTGCTGGTGGCGATTGCCGACGTCAGCCACTACGTGCGCAACGGCGCGCCGCTGGATGTGGACGCCTACGAGCGCGCCACCAGCGTGTACTTTCCGCGCCGCGTCATCCCCATGCTGCCGGAAAAGCTCAGCAACGGCCTGTGCTCGCTCAACCCCGAGGTCGAGCGCCTGAGCATGGTGTGCGACATGCTGGTCACGGCGCAGGGTGACGTCCATGCCTACCAGTTCTACCCGGCCGTCATCCGCAGCCATGCGCGGCTGACCTACACCGAGGTGGCGGCCATCCTGGCCAACACGCGCGGCCCCGAGGCGGCGCGCCGGCAGGCGCGCGTGCAGAACCTGCTGGACCTGCACGACGCGTTCCGCGCCTTGCTGAAGGCGCGCGAGCGGCGCGGCGCGGTGGACTTCGACACCGTGGAGACGCAGATCGTCTGCGACGAGGCCGGCCGCATCGAGAAGATCGTGCCGCGCCAGCGCAACGACGCGCACCGCCTGATCGAGGAGTGCATGCTGGCGGCCAACGTGTGCAGCGCCGACTTCATCGGCCAGGGCAAGCACGCCGGCCTGTACCGCGTGCACGAGGGCCCGACGCCAGAAAAGCTCGAGCTGCTGCGCGCCTACCTGAAGGCGCTGGGCCTGGGCCTGTCGGTCAGCGACGAGCCGCGGCCGGACGAGTTCCAGCGCATCGCCGCGGCCACCGCCGAGCGTCCCGACGCCGAGCAGATCCACATGATGCTGCTGCGCGCCATGAGCCAGGCCATCTACTCGCCCGTCAACAGCGGGCACTTCGGCCTGGCCTACGAGGCGTACACGCATTTCACCAGCCCGATCCGGCGCTACCCGGACCTGCTGGTGCACCGCGTCATCAAGGCCATCCTGGCCGAGCGCAAGTACCAGCTGCCGAGTCTGCCCACGCCCGGCGAGGCGCACGAAAAGCTCAGCAAGCGCTTGAAAAAAGATAGCTTGTCGCGCAAGCGGGAACAGCGCGAGCGGCCCGATCGCCTGTCACCCGAGGTGCAGGCCTGGGAAGCCGCCGGCCTGCACTGCAGCGCCAACGAGCGGCGCGCCGACGAGGCCAGCCGCGACGTCGAGGCCTGGCTCAAGTGCAAGTACATGAAGGAGCACCTGGGCGAGGAATACGCCGGCACCGTCAGCGCCGCCACCAGCTTCGGCCTGTTCGTCACGCTCAGCGAGCTGCACGTCGAGGGCCTGGTGCACATCACCGAACTGGGCGGCGAGTACTTCCGCTTCGACGAAGTCCGCCAGGAGCTGCGCGGCGAGCGCACCGGCATCCGCTACGCCATCGGCACGCGGGTGCGCGTGCAGGTCAGCCGCGTCGACCTGGACGCGCGCAAGATCGACTTCCGGCTGGTGCGCGAGGACGAAGACCTGTTGGCGCGCGCCCCGCGCGACAAGGGCGCGGCGCCCGCCGCCGAGCGCGGCCGCCCGGCCAAGGCCTCGGCCAAGCGCGCCGCGCGCCAGCAGCGCGACGCCGAGCGCGCCAGCCCCAGGCCCTCGCCGATGCAGGCGCTCCAGTCGGCCGCGCGCAAGGCGGCGGCCAAGAAGGGCGCCGCCAGCGGCAAGCCGCGCAAGACGCGACGCTGA
PROTEIN sequence
Length: 748
VQGHRDGHGFVLRDDGDADIYLPPNEMRAVLHRDRVRVRIARQDRRGRPEGRVLEIVERPPQPIIGRLLHEAGIWLVAPEDRRYGQDVLIPKAAIGAARPGQVVVVELTEPPALYGQPVGRVKEVLGEIDDPGMEIEIAVRKYGVPHEFSDAAIGEARALPDSVQPRDRAGRVDLTDVPLVTIDGEDARDFDDAVYCQPAVVTGRGKKPNGWRLLVAIADVSHYVRNGAPLDVDAYERATSVYFPRRVIPMLPEKLSNGLCSLNPEVERLSMVCDMLVTAQGDVHAYQFYPAVIRSHARLTYTEVAAILANTRGPEAARRQARVQNLLDLHDAFRALLKARERRGAVDFDTVETQIVCDEAGRIEKIVPRQRNDAHRLIEECMLAANVCSADFIGQGKHAGLYRVHEGPTPEKLELLRAYLKALGLGLSVSDEPRPDEFQRIAAATAERPDAEQIHMMLLRAMSQAIYSPVNSGHFGLAYEAYTHFTSPIRRYPDLLVHRVIKAILAERKYQLPSLPTPGEAHEKLSKRLKKDSLSRKREQRERPDRLSPEVQAWEAAGLHCSANERRADEASRDVEAWLKCKYMKEHLGEEYAGTVSAATSFGLFVTLSELHVEGLVHITELGGEYFRFDEVRQELRGERTGIRYAIGTRVRVQVSRVDLDARKIDFRLVREDEDLLARAPRDKGAAPAAERGRPAKASAKRAARQQRDAERASPRPSPMQALQSAARKAAAKKGAASGKPRKTRR*