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SCNpilot_bf_inoc_scaffold_858_curated

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Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_858_curated_31
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37349..37759
DNA (411bp) protein (137aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQA0_ACIAC
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABM33138.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_bf_inoc_scaffold_858_curated_32
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38152..39207
DNA (1056bp) protein (352aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=LPXK_ACISJ rbh
SCNpilot_bf_inoc_scaffold_858_curated_33
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39204..39536
DNA (333bp) protein (111aa)
Multidrug transporter n=2 Tax=Pandoraea RepID=V5UCV7_9BURK
Multidrug transporter {ECO:0000313|EMBL:AIU26536.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
cation/cationic drug transporter
SCNpilot_bf_inoc_scaffold_858_curated_34
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39547..39756
DNA (210bp) protein (70aa)
UPF0434 protein Rta_21930 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZS8_RAMTT
hypothetical protein; K09791 hypothetical protein
UPF0434 protein Rta_21930 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_858_curated_35
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39756..40523
DNA (768bp) protein (256aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZS9_RAMTT
SCNpilot_bf_inoc_scaffold_858_curated_36
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40760..41416
DNA (657bp) protein (219aa)
adk; adenylate kinase (EC:2.7.4.3)
adenylate kinase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035DD44C
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_858_curated_37
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41523..42119)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLS9_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96518.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_bf_inoc_scaffold_858_curated_38
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42323..42988
DNA (666bp) protein (222aa)
lexA; transcriptional regulator LexA; K01356 repressor LexA [EC:3.4.21.88]
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
LexA repressor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZT4_RAMTT
SCNpilot_bf_inoc_scaffold_858_curated_39
unknown

Not on your lists

43116..43448
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_858_curated_40
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43604..44611
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRY3_ACIAC
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABM33721.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_bf_inoc_scaffold_858_curated_41
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44753..46276
DNA (1524bp) protein (508aa)
3-hydroxy-acyl-CoA dehydrogenase (EC:1.1.1.35); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129C1_POLSJ
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_858_curated_42
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46548..47327
DNA (780bp) protein (260aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FA25D6
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_858_curated_43
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47435..48154
DNA (720bp) protein (240aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037AC9C5
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACS19255.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_858_curated_44
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48156..49241
DNA (1086bp) protein (362aa)
Aminoglycoside phosphotransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4I2_ACIDE
aminoglycoside phosphotransferase; K06979
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EER60624.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_bf_inoc_scaffold_858_curated_45
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49302..50561
DNA (1260bp) protein (420aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase domain protein n=4 Tax=Ralstonia RepID=B2U7M4_RALPJ
Uncharacterized protein {ECO:0000313|EMBL:EGY63315.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_bf_inoc_scaffold_858_curated_46
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51154..51675)
DNA (522bp) protein (174aa)
Stringent starvation protein B n=1 Tax=Polaromonas sp. CF318 RepID=J2LH39_9BURK
stringent starvation protein B
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_858_curated_47
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51692..52303)
DNA (612bp) protein (204aa)
Glutathione s-transferase domain protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXJ4_9BURK
Glutathione s-transferase domain protein {ECO:0000313|EMBL:EGI75561.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
glutathione S-transferase domain-containing protein
SCNpilot_bf_inoc_scaffold_858_curated_48
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52402..53166)
DNA (765bp) protein (255aa)
Cytochrome c1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W460_ACISJ
Cytochrome c1 {ECO:0000313|EMBL:GAO26732.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
SCNpilot_bf_inoc_scaffold_858_curated_49
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53187..54632)
DNA (1446bp) protein (482aa)
Cytochrome b n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXJ6_9BURK
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
cytochrome b/b6 domain-containing protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
SCNpilot_bf_inoc_scaffold_858_curated_50
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54645..55010)
DNA (366bp) protein (122aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
ubiquinol-cytochrome C reductase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959BE9
SCNpilot_bf_inoc_scaffold_858_curated_51
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55391..55813
DNA (423bp) protein (141aa)
Large-conductance mechanosensitive channel n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=MSCL_METPP
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCNpilot_bf_inoc_scaffold_858_curated_52
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55884..56909)
DNA (1026bp) protein (342aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U80_RHOFD
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_858_curated_53
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56993..57787)
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYC7_RAMTT
hypothetical protein
SCNpilot_bf_inoc_scaffold_858_curated_54
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57869..59257
DNA (1389bp) protein (463aa)
Ferric reductase domain protein transmembrane component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDX3_ACIET
ferric reductase
Ferric reductase domain protein transmembrane component {ECO:0000313|EMBL:ACM32227.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_858_curated_55
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59507..60658
DNA (1152bp) protein (384aa)
htra2 peptidase (EC:3.4.21.108)
2-alkenal reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F2B4E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_bf_inoc_scaffold_858_curated_56
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60757..61551)
DNA (795bp) protein (265aa)
Sec-independent protein translocase protein TatC n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDX1_ACIET
Sec-independent protein translocase subunit TatC; K03118 sec-independent protein translocase protein TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_858_curated_57
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61659..62135)
DNA (477bp) protein (159aa)
Sec-independent protein translocase protein TatB n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XVS5_DELAC
tatB; sec-independent translocase; K03117 sec-independent protein translocase protein TatB
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_858_curated_58
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62217..62447)
DNA (231bp) protein (77aa)
Sec-independent protein translocase protein TatA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV19_9BURK
tatA; twin arginine translocase protein A
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_858_curated_59
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62612..62986)
DNA (375bp) protein (125aa)
Histidine triad (HIT) protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRR6_9BURK
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIK91906.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
SCNpilot_bf_inoc_scaffold_858_curated_60
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63022..64116)
DNA (1095bp) protein (365aa)
Patatin n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QB82_ACIAP
patatin; K07001 NTE family protein
Patatin {ECO:0000313|EMBL:ADX44944.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Displaying items 31-60 of 108 in total

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