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SCNpilot_bf_inoc_scaffold_899_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(31568..31846)

Top 3 Functional Annotations

Value Algorithm Source
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 104
  • Evalue 5.80e-20
CheW protein; K02659 twitching motility protein PilI similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 104
  • Evalue 1.80e-20
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 104
  • Evalue 8.10e-20

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GTGAGCGGATCCGAGTCGGGCCCGGCACGCAGCGAAGGCGATCTGGCGCCATGCCGCCTGGTGGCGCTCAACCCGGTGCTGGGCGTCAACTGTGCCTTGCTGGTCGACCGACTGCTGGGTCTGCGGACCACGGAAGCGTTTGCATCCTCGACGCCATCGGCGCCCACGGCGCCGCAGTATTTTGGTCATCGTTACACCGATGGCGCCGGTCAGTCATGGCAGGAATTGAACCTGCAGCTTCTTTCCCAGCACCCGGCCTTTCTGGGCATTGGTGCGTAG
PROTEIN sequence
Length: 93
VSGSESGPARSEGDLAPCRLVALNPVLGVNCALLVDRLLGLRTTEAFASSTPSAPTAPQYFGHRYTDGAGQSWQELNLQLLSQHPAFLGIGA*