name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_bf_inoc_scaffold_899_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84..308
|
Putative uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=D0J1A3_COMT2
hypothetical protein; K02192 bacterioferritin-associated ferredoxin
Ferredoxin {ECO:0000313|EMBL:KGH10240.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
844..1128
|
Candidate energy transducing system n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1U5_RAMTT
tonB; energy transducing system; K03832 periplasmic protein TonB
Tax=GWA2_Curvibacter_64_110_curated
|
|
SCNpilot_bf_inoc_scaffold_899_curated_3
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1136..1849
|
Candidate biopolymer transport protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1U6_RAMTT
tolQ; biopolymer transport protein; K03561 biopolymer transport protein ExbB
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_bf_inoc_scaffold_899_curated_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1855..2274
|
Outer membrane transport energization protein ExbD n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQE5_POLNA
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CDS54601.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2271..2489
|
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2H7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46555.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_6
unknown
|
Not on your lists |
comp(2641..2928)
|
This feature has no annotations |
|
SCNpilot_bf_inoc_scaffold_899_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3639..4157)
|
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91802.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4338..5429)
|
ATPase involved in chromosome partitioning n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJL5_9BURK
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EHR70370.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ATP-binding protein; K03593 ATP-binding protein involved in chromosome partitioning
|
|
SCNpilot_bf_inoc_scaffold_899_curated_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5496..6698
|
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Acidovorax sp. CF316 RepID=J0K360_9BURK
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EJE48805.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
patatin; K07001 NTE family protein
|
|
SCNpilot_bf_inoc_scaffold_899_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6735..8816
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5Z8_ACIDE
|
|
SCNpilot_bf_inoc_scaffold_899_curated_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9015..10718
|
Permease family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HII5_ACHXA
permease; K03321 sulfate permease, SulP family
Permease family protein 1 {ECO:0000313|EMBL:ADP14270.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_12
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10748..11785)
|
LacI family transcriptional regulator n=36 Tax=Bordetella RepID=F4LHG3_BORPC
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Probable LacI-family transcriptional regulator {ECO:0000313|EMBL:CCJ63423.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_13
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11791..12414)
|
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QGL3_BORBO
leuD; 3-isopropylmalate dehydratase small subunit
|
|
SCNpilot_bf_inoc_scaffold_899_curated_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12401..13831)
|
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U2K6_BORBO
|
|
SCNpilot_bf_inoc_scaffold_899_curated_15
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13995..15158
|
Enolase C-terminal domain-like protein n=36 Tax=Bordetella RepID=V8U6E1_BORPT
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:KCB44404.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
mandelate racemase
rbh
|
|
SCNpilot_bf_inoc_scaffold_899_curated_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15172..16086
|
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
2-dehydropantoate 2-reductase n=34 Tax=Bordetella RepID=F4LHV9_BORPC
|
|
SCNpilot_bf_inoc_scaffold_899_curated_17
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16114..17088
|
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037CB42C
Uncharacterized protein {ECO:0000313|EMBL:ESJ04002.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
|
|
SCNpilot_bf_inoc_scaffold_899_curated_18
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17139..17660)
|
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWN0_RAMTT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_bf_inoc_scaffold_899_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17763..17984
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0T5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01136.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_20
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18042..18893
|
Segregation and condensation protein A-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWN2_RAMTT
segregation and condensation protein A; K05896 segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19160..20470)
|
Dihydroorotase {ECO:0000313|EMBL:KJA10267.1}; EC=3.5.2.3 {ECO:0000313|EMBL:KJA10267.1};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
pyrC; dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZG3_RAMTT
|
|
SCNpilot_bf_inoc_scaffold_899_curated_22
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20658..21620)
|
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=5080217 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
|
|
SCNpilot_bf_inoc_scaffold_899_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21623..22123)
|
uracil phosphoribosyltransferase n=1 Tax=Curvibacter lanceolatus RepID=UPI000381B3F2
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AFU47619.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22120..22539)
|
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Holliday junction resolvase n=1 Tax=Variovorax paradoxus RepID=UPI0003718939
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_bf_inoc_scaffold_899_curated_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22536..23135)
|
UPF0301 protein Varpa_5221 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5C3_VARPE
hypothetical protein; K07735 putative transcriptional regulator
UPF0301 protein Varpa_5221 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23190..29207)
|
CheA signal transduction histidine kinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT48_9BURK
CheA signal transduction histidine kinase; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Tax=GWA2_Burkholderiales_64_37_curated
|
|
SCNpilot_bf_inoc_scaffold_899_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29285..31546)
|
Candidate twitching motility protein, methyl-accepting chemotaxis protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZH0_RAMTT
pilJ; twitching motility protein, methyl-accepting chemotaxis protein; K02660 twitching motility protein PilJ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_bf_inoc_scaffold_899_curated_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31568..31846)
|
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS
CheW protein; K02659 twitching motility protein PilI
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31843..32046)
|
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS
CheW protein; K02659 twitching motility protein PilI
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_bf_inoc_scaffold_899_curated_30
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32053..32418)
|
chemotaxis protein CheY n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003492DE8
response regulator CheY; K02658 twitching motility two-component system response regulator PilH
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|