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SCNpilot_bf_inoc_scaffold_899_curated_29

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(31843..32046)

Top 3 Functional Annotations

Value Algorithm Source
CheW protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL78_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 51.0
  • Bit_score: 77
  • Evalue 5.60e-12
CheW protein; K02659 twitching motility protein PilI similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 51.0
  • Bit_score: 77
  • Evalue 1.70e-12
CheW protein {ECO:0000313|EMBL:ACS21229.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 51.0
  • Bit_score: 77
  • Evalue 7.80e-12

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGTCCAACAAGCAAGCGCTGCGCGAATTCCAGAGCCGTCTGGCGATGCGGCTGCAAGCTGCCCAGGCGGTGGGGGTGGCAGCGTCGTGGCTGGCGGTGGAGGCCGGGGCCCAGCGCCTGCTGTTTCCGCTGAGCCACGCCGGCGAGATTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACCTGGCGCACTTCGTGA
PROTEIN sequence
Length: 68
MSNKQALREFQSRLAMRLQAAQAVGVAASWLAVEAGAQRLLFPLSHAGEIFXXXXXXXXXXXTWRTS*