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SCNpilot_bf_inoc_scaffold_590_curated_71

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 77759..78361

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237836D similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 197.0
  • Bit_score: 292
  • Evalue 2.50e-76
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 200.0
  • Bit_score: 299
  • Evalue 2.90e-78
multiple antibiotic resistance (marc)-like protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 197.0
  • Bit_score: 290
  • Evalue 3.00e-76

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAGTTACAGCTTCGCCTCCGCCACCGTCCTGCTGCTGCTGATCACCGACCCGGTGGGCAACATCCCGATCTTCGCCAACGCGCTGAAGGCGGTGGCGCCGGCGCGGCGCCGCCGCGTGATCCTGCGCGAGGTGCTGATCGCCTTCGGGCTGCTGCTGGGCTTCATGTTCGCGGGCGACGGCTTTCTGCGCGTGATGAACCTGTCGCCGCTGTCGCTGCAGATGGCCGGCGGCGTGGTGCTGTTCCTGATCGCGCTGCGCATGGTGTTTCCGCCGCCGCCGGCGCCGGTGGAGCCGACGGCGGCCGAGCCGCTGATCGTGCCGCTGGCCATTCCGGCGCTGGCCGGGCCGTCGGCGCTGGCCACCGTGATGCTGCTGGTCAGCCAGGCGCCCGAGCGCCGCTGGGAATGGGTGGGCGCGCTCAGCGTCACCATGGCGGTGTGCGCCATCGTGCTGCTGCTGGCCGAGCGCCTGCAGCAGCGCGTGGGCCCGCGCGTGCTGCAGGCCTTCGAGCGGTTGATGGGCCTGATCCTGGTGGCCGTGGCGGTGGAGATGCTGCTGCGCGCGGTCAGAACGCTGGCGGCGCAGCTCGGCGGCGGCTGA
PROTEIN sequence
Length: 201
MSYSFASATVLLLLITDPVGNIPIFANALKAVAPARRRRVILREVLIAFGLLLGFMFAGDGFLRVMNLSPLSLQMAGGVVLFLIALRMVFPPPPAPVEPTAAEPLIVPLAIPALAGPSALATVMLLVSQAPERRWEWVGALSVTMAVCAIVLLLAERLQQRVGPRVLQAFERLMGLILVAVAVEMLLRAVRTLAAQLGGG*