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SCNpilot_bf_inoc_scaffold_590_curated

Search features with annotation key words

Displaying items 61-90 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_590_curated_61
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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69756..70958
DNA (1203bp) protein (401aa)
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX23_AZOBR
putative ABC transporter, substrate binding protein; possible branched chain amino acid binding protein
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein {ECO:0000313|EMBL:CCD02432.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_bf_inoc_scaffold_590_curated_62
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71130..71996)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D611_COMTE
Uncharacterized protein {ECO:0000313|EMBL:KGG96415.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_590_curated_63
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72129..72740)
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=1270148 bin=GWE1_Burkholderiales_65_30 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_590_curated_64
unknown

Not on your lists

comp(72844..73209)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_590_curated_65
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73285..73758)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1270146 bin=GWE1_Burkholderiales_65_30 species=Neisseria weaveri genus=Neisseria taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_bf_inoc_scaffold_590_curated_66
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73783..74250)
DNA (468bp) protein (156aa)
Uncharacterized protein id=1270145 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K09796 hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_590_curated_67
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74480..74800)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XHJ4_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU51996.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_bf_inoc_scaffold_590_curated_68
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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75126..75776
DNA (651bp) protein (217aa)
gst-related protein; K00799 glutathione S-transferase [EC:2.5.1.18] id=5080214 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glutathione transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_590_curated_69
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75836..76645)
DNA (810bp) protein (270aa)
Unsaturated acyl-CoA hydratase {ECO:0000313|EMBL:EIK88955.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EIK88955.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
unsaturated acyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Unsaturated acyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIB5_9BURK
SCNpilot_bf_inoc_scaffold_590_curated_70
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(76711..77547)
DNA (837bp) protein (279aa)
Putative membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IUF7_BORPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP43538.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_bf_inoc_scaffold_590_curated_71
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77759..78361
DNA (603bp) protein (201aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237836D
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
multiple antibiotic resistance (marc)-like protein
SCNpilot_bf_inoc_scaffold_590_curated_72
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78726..79523)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6CV91_9BACI
Leucobacter komagatae strain VKM ST2845 L_komagatae_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52118.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
SCNpilot_bf_inoc_scaffold_590_curated_73
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79780..80781)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1I4_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94768.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_590_curated_74
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80905..81960
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSQ5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24617.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_590_curated_75
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82092..82373
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XHK5_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU52006.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_bf_inoc_scaffold_590_curated_76
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82377..83459)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00035F46EC
putative ammonia monooxygenase
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_bf_inoc_scaffold_590_curated_77
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83481..84308
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYW6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44189.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_590_curated_78
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84315..87605)
DNA (3291bp) protein (1097aa)
carbamoyl-phosphate synthase large subunit n=1 Tax=Acidovorax radicis RepID=UPI0002377BF5
carbamoyl-phosphate synthase ATP-binding subunit L
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_bf_inoc_scaffold_590_curated_79
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(87720..89327)
DNA (1608bp) protein (536aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase id=12551330 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_bf_inoc_scaffold_590_curated_80
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89441..90289
DNA (849bp) protein (283aa)
purU; formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
formyltetrahydrofolate deformylase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000310A289
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_590_curated_81
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90424..91131)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVH2_RAMTT
hypothetical protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:AEG91548.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_590_curated_82
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91176..92219
DNA (1044bp) protein (348aa)
Twitching motility protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8P3_ACIDE
Twitching motility protein {ECO:0000313|EMBL:EER59152.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
twitching motility protein
SCNpilot_bf_inoc_scaffold_590_curated_83
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92324..93460
DNA (1137bp) protein (379aa)
Pilus retraction protein PilT n=1 Tax=Acidovorax sp. CF316 RepID=J0KDW8_9BURK
twitching motility protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_590_curated_84
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93512..94429
DNA (918bp) protein (306aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ACM31893.1}; EC=1.1.1.31 {ECO:0000313|EMBL:ACM31893.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBX3_ACIET
SCNpilot_bf_inoc_scaffold_590_curated_85
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94445..95194)
DNA (750bp) protein (250aa)
Transport-associated protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMJ0_9BURK
Transporter {ECO:0000313|EMBL:KJA10878.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
transport-associated protein
SCNpilot_bf_inoc_scaffold_590_curated_86
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95191..95790)
DNA (600bp) protein (200aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVI0_RAMTT
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_bf_inoc_scaffold_590_curated_87
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95921..96310)
DNA (390bp) protein (130aa)
UPF0102 protein Aave_0630 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=Y630_ACIAC
uncharacterized LOC100492036
UPF0102 protein AZ34_02195 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
SCNpilot_bf_inoc_scaffold_590_curated_88
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96362..97315
DNA (954bp) protein (318aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Putative ribosomal RNA small subunit methyltransferase I n=1 Tax=Variovorax paradoxus B4 RepID=T1XHP4_VARPD
putative ribosomal RNA small subunit methyltransferase I
SCNpilot_bf_inoc_scaffold_590_curated_89
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97484..98308)
DNA (825bp) protein (275aa)
SEC-C motif domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5C5_VARPE
Variovorax paradoxus strain MEDvA23 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36661.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
sec-c motif domain-containing protein; K07039 uncharacterized protein
SCNpilot_bf_inoc_scaffold_590_curated_90
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98368..99273)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002EA8342
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying items 61-90 of 159 in total

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