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SCNpilot_bf_inoc_scaffold_11_curated_44

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 46680..47162

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 159.0
  • Bit_score: 201
  • Evalue 6.50e-49
Peptide deformylase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PPW3_9FUSO similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 159.0
  • Bit_score: 201
  • Evalue 4.60e-49
N-formylmethionyl-tRNA deformylase similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 147.0
  • Bit_score: 194
  • Evalue 3.00e-47

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Taxonomy

Fusobacterium ulcerans → Fusobacterium → Fusobacteriales → Fusobacteriia → Fusobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCAGAGAGAAATACTTTTGCTAGGAGACGAAAGACTATATGAAATGAGTGTACCAGTCACAAGCTCTGAGTGGTCAACGCTTGAAGCTTTAGAAAATGACCTTCACGATACTTTAATGGGTTTCAGAGAACGATATGGCGTCGGACGAGCGATAGCAGCACCACAAATTGGTGTTAAAAAAAGAGTAATCTATATGTATATCGATCAGCCCATTCTCATGGTTAATCCTAAGCTGACTTTTCTAGGTGAGGATAAAATTGAAGTGCTCGATGACTGTATGTCGTTTCCCTATTTATTGGTTAGGCTAGAGCGATATAAAAAATGTCAGTTGTCTTATATAGATCGAGAAGGAAATGAGCAATCGATTCTTTTAGAGGATGACCTATCTGAACTCATTCAACATGAGTATGATCATTTAGATGGCATACTTGCGACGATGCGTGCAAAACACATCAAGGATTTGGTACACAAAAGGCCTTAA
PROTEIN sequence
Length: 161
MQREILLLGDERLYEMSVPVTSSEWSTLEALENDLHDTLMGFRERYGVGRAIAAPQIGVKKRVIYMYIDQPILMVNPKLTFLGEDKIEVLDDCMSFPYLLVRLERYKKCQLSYIDREGNEQSILLEDDLSELIQHEYDHLDGILATMRAKHIKDLVHKRP*