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SCNpilot_bf_inoc_scaffold_59_curated

Search features with annotation key words

Displaying items 31-60 of 300 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_59_curated_31
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45166..46986)
DNA (1821bp) protein (607aa)
potassium transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034B60F8
Potassium transporter {ECO:0000313|EMBL:GAN45934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Kef-type potassium/proton antiporter, CPA2 family
SCNpilot_bf_inoc_scaffold_59_curated_32
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47110..50178)
DNA (3069bp) protein (1023aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC98_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL97089.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/multidrug efflux pump
SCNpilot_bf_inoc_scaffold_59_curated_33
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50276..51358)
DNA (1083bp) protein (361aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_59_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51355..52770)
DNA (1416bp) protein (472aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX01_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG87361.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_59_curated_35
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52942..53532
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003816A64
Membrane protein {ECO:0000313|EMBL:AHX15583.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_36
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53522..53746
DNA (225bp) protein (75aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NCK0_9GAMM
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:GAN45592.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_59_curated_37
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53743..55374
DNA (1632bp) protein (544aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL07_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL87898.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_bf_inoc_scaffold_59_curated_38
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55582..56316
DNA (735bp) protein (245aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH99_9GAMM
ABC-type Na+ transport system, ATPase component
Sodium ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL98840.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_bf_inoc_scaffold_59_curated_39
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56313..57488
DNA (1176bp) protein (392aa)
ABC transporter sodium permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WHU9_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KGI78949.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type Na+ efflux pump, permease component
SCNpilot_bf_inoc_scaffold_59_curated_40
unknown

Not on your lists

comp(57455..57553)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_41
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57571..57888
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382787F
Uncharacterized protein {ECO:0000313|EMBL:GAN45771.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ycdJ; arylesterase
SCNpilot_bf_inoc_scaffold_59_curated_42
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57921..58802
DNA (882bp) protein (294aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BKL5_9XANT
Beta-lactamase {ECO:0000313|EMBL:KGM57554.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_59_curated_43
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58908..59825
DNA (918bp) protein (306aa)
Putative metal-dependent hydrolase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJV1_TERRK
Cyclase {ECO:0000313|EMBL:GAN45762.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative metal-dependent hydrolase
SCNpilot_bf_inoc_scaffold_59_curated_44
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59894..60757
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344F121
Endonuclease {ECO:0000313|EMBL:AHX14743.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
metal-dependent hydrolase
SCNpilot_bf_inoc_scaffold_59_curated_45
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(60893..61459)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037922C9
Uncharacterized protein {ECO:0000313|EMBL:AHG92491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_46
unknown

Not on your lists

61767..62435
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_47
unknown

Not on your lists

comp(62368..62580)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_48
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62641..63474)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95803.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_49
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63563..63958)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98314.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_50
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64296..66443)
DNA (2148bp) protein (716aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L4_9GAMM
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:EIL95805.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_59_curated_51
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66873..68258
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8B72
Heat-shock protein {ECO:0000313|EMBL:GAN45211.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
periplasmic serine protease, Do/DeqQ family
SCNpilot_bf_inoc_scaffold_59_curated_52
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68449..69771
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344A2F3
Phosphate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIL98317.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type phosphate transport system, periplasmic component
SCNpilot_bf_inoc_scaffold_59_curated_53

Not on your lists

69820..71193
DNA (1374bp) protein (458aa)
Leucine aminopeptidase n=3 Tax=mine drainage metagenome RepID=T0YE09_9ZZZZ
Leucine aminopeptidase {ECO:0000313|EMBL:EQD33586.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
leucyl aminopeptidase
SCNpilot_bf_inoc_scaffold_59_curated_54
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71212..72594)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Histidine kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WB73_9GAMM
histidine kinase
SCNpilot_bf_inoc_scaffold_59_curated_55
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72704..73369)
DNA (666bp) protein (222aa)
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WXV7_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:GAN45595.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
winged helix family two component transcriptional regulator
SCNpilot_bf_inoc_scaffold_59_curated_56
unknown

Not on your lists

73511..74053
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_57
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74190..74834
DNA (645bp) protein (215aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
SCNpilot_bf_inoc_scaffold_59_curated_58
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74907..76010
DNA (1104bp) protein (368aa)
ADP-heptose--LPS heptosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAW1_9GAMM
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:EIL96602.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ADP-heptose--LPS heptosyltransferase
SCNpilot_bf_inoc_scaffold_59_curated_59
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76029..78269)
DNA (2241bp) protein (747aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KHD64589.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KHD64589.1};; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
isocitrate dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA5B4
SCNpilot_bf_inoc_scaffold_59_curated_60
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78394..79521
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034800D8
GumN protein {ECO:0000313|EMBL:EIL89125.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
GumN protein
Displaying items 31-60 of 300 in total

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