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SCNpilot_bf_inoc_scaffold_59_curated

Search features with annotation key words

Displaying items 1-30 of 300 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_59_curated_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2379
DNA (2379bp) protein (793aa)
protein kinase (EC:2.7.11.1); K08282 non-specific serine/threonine protein kinase [EC:2.7.11.1]
Protein kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX4_9GAMM
Protein kinase {ECO:0000313|EMBL:EIL91715.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_bf_inoc_scaffold_59_curated_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2376..2660
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91714.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_bf_inoc_scaffold_59_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2931..4904
DNA (1974bp) protein (658aa)
Hemolysin activator protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX2_9GAMM
Hemolysin activator protein {ECO:0000313|EMBL:EIL91713.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hemolysin activator protein
SCNpilot_bf_inoc_scaffold_59_curated_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4918..12498
DNA (7581bp) protein (2527aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003475C6E
yapH; hemagglutinin/hemolysin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_59_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12500..13654
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94007.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_59_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13669..14712)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type VI secretion-associated protein, ImpA family; K11902 type VI secretion system protein ImpA
SCNpilot_bf_inoc_scaffold_59_curated_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15038..16837
DNA (1800bp) protein (600aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHB8_9GAMM
SCNpilot_bf_inoc_scaffold_59_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16849..17250)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Z4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94535.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17273..17761)
DNA (489bp) protein (163aa)
bsaA; glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003811349
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_bf_inoc_scaffold_59_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17895..20564)
DNA (2670bp) protein (890aa)
Magnesium-transporting ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC1_9GAMM
Magnesium-transporting ATPase {ECO:0000313|EMBL:EIL98862.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
magnesium-translocating P-type ATPase
SCNpilot_bf_inoc_scaffold_59_curated_11
unknown

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comp(20834..20965)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21381..21986
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W503_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94544.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K07152
SCNpilot_bf_inoc_scaffold_59_curated_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21983..22438
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Burkholderia thailandensis RepID=N0AJT0_BURTH
Uncharacterized protein {ECO:0000313|EMBL:KGI77845.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22387..23391)
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WXF8_9BURK
Membrane protein {ECO:0000313|EMBL:KGI77844.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_15
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23399..25591)
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_bf_inoc_scaffold_59_curated_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25645..26565)
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Protoheme IX farnesyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ81_9GAMM
protoheme IX farnesyltransferase
SCNpilot_bf_inoc_scaffold_59_curated_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26623..27834)
DNA (1212bp) protein (404aa)
Cytochrome oxidase assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W308_9GAMM
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:KGI76815.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
uncharacterized protein required for cytochrome oxidase assembly
SCNpilot_bf_inoc_scaffold_59_curated_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27834..28382)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DA0323
Uncharacterized protein {ECO:0000313|EMBL:KGI76682.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28389..29135)
DNA (747bp) protein (249aa)
Protein, SURF1 family n=2 Tax=mine drainage metagenome RepID=T1A8K9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI76683.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_20
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29202..29426
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D5AD99
Uncharacterized protein {ECO:0000313|EMBL:AIF46672.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_59_curated_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29465..31291)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003785D91
Uncharacterized protein {ECO:0000313|EMBL:AIF46045.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TPR repeat-containing protein
SCNpilot_bf_inoc_scaffold_59_curated_22
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31417..32292)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003702BF3
MFS transporter {ECO:0000313|EMBL:KGI76685.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
heme/copper-type cytochrome/quinol oxidase, subunit 3
SCNpilot_bf_inoc_scaffold_59_curated_23
unknown

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comp(32337..32504)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_59_curated_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32678..34288)
DNA (1611bp) protein (537aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY2_9GAMM
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KGI76686.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome c oxidase, subunit I
SCNpilot_bf_inoc_scaffold_59_curated_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34340..35320)
DNA (981bp) protein (327aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome C oxidase, subunit II protein (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=mine drainage metagenome RepID=T1B824_9ZZZZ
SCNpilot_bf_inoc_scaffold_59_curated_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35427..35999)
DNA (573bp) protein (191aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ89_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45546.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
integral membrane protein
SCNpilot_bf_inoc_scaffold_59_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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36074..39238
DNA (3165bp) protein (1055aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AGG87449.1}; EC=1.5.1.12 {ECO:0000313|EMBL:AGG87449.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AGG87449.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY5_9GAMM
SCNpilot_bf_inoc_scaffold_59_curated_28
unknown

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39421..39855
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036E6286
SCNpilot_bf_inoc_scaffold_59_curated_29

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comp(39950..41311)
DNA (1362bp) protein (454aa)
Membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=mine drainage metagenome RepID=T1CD28_9ZZZZ
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EQD64585.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ompP1; outer membrane protein; K06076 long-chain fatty acid transport protein
SCNpilot_bf_inoc_scaffold_59_curated_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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41415..44978
DNA (3564bp) protein (1188aa)
Ankyrin repeat-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB0_9GAMM
Ankyrin repeat-containing protein {ECO:0000313|EMBL:EIL89751.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ankyrin repeat-containing protein
Displaying items 1-30 of 300 in total

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