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SCNpilot_bf_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 151-180 of 352 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_32_curated_151
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186546..187508)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B2751
Lytic transglycosylase {ECO:0000313|EMBL:AHX12288.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
lytic transglycosylase
SCNpilot_bf_inoc_scaffold_32_curated_152
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187809..189140
DNA (1332bp) protein (444aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Dyella japonica RepID=UPI0002E9EB67
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_bf_inoc_scaffold_32_curated_153
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189158..191422)
DNA (2265bp) protein (755aa)
Serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:EZP42616.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EZP42616.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030B4423
SCNpilot_bf_inoc_scaffold_32_curated_154
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191495..192058)
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVZ3_HALO1
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY14127.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_bf_inoc_scaffold_32_curated_155
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192288..193739
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2G7H2_DESGI
NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97468.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_156
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193783..195051)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD92_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF08353.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_157
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195196..196737
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R609_ISOPI
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_bf_inoc_scaffold_32_curated_158
unknown

Not on your lists

comp(196775..197524)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_159
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197665..198648
DNA (984bp) protein (328aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIX1_9GAMM
PhoH {ECO:0000313|EMBL:AHX12286.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
phosphate starvation-inducible protein PhoH, predicted ATPase
SCNpilot_bf_inoc_scaffold_32_curated_160
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198648..199142
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Endoribonuclease YbeY n=1 Tax=Rhodanobacter denitrificans RepID=M4NK41_9GAMM
metalloprotein, YbeY/UPF0054 family
SCNpilot_bf_inoc_scaffold_32_curated_161
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199170..199892)
DNA (723bp) protein (241aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI000380DA50
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
SCNpilot_bf_inoc_scaffold_32_curated_162
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199990..200817)
DNA (828bp) protein (276aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
pstB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Pantoea sp. GM01 RepID=J3DKT5_9ENTR
SCNpilot_bf_inoc_scaffold_32_curated_163
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200814..202094)
DNA (1281bp) protein (427aa)
Phosphate ABC transporter, permease subunit n=1 Tax=Erwinia billingiae (strain Eb661) RepID=D8MVN1_ERWBE
Phosphate ABC transporter permease {ECO:0000313|EMBL:AIX72899.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_32_curated_164
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202097..203191)
DNA (1095bp) protein (365aa)
ABC transporter permease n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289F277
ABC transporter permease {ECO:0000313|EMBL:KHJ51283.1}; TaxID=115561 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas hydrothermalis.;"
binding-protein-dependent transporters inner membrane component; K02037 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_32_curated_165
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203371..204510
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F5357
Glycosyl transferase {ECO:0000313|EMBL:EYR66642.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
glycosyl transferase
SCNpilot_bf_inoc_scaffold_32_curated_166
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204507..205067
DNA (561bp) protein (187aa)
phosphoesterase PA-phosphatase n=1 Tax=Dyella japonica RepID=UPI0002FF02FC
Phosphoesterase {ECO:0000313|EMBL:KGI79120.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
PAP2 superfamily protein
SCNpilot_bf_inoc_scaffold_32_curated_167
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(205048..205653)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NG08_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC31427.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
SCNpilot_bf_inoc_scaffold_32_curated_168
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205784..206659)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DB4C5
Nitrilase {ECO:0000313|EMBL:AKC85703.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
nitrilase
SCNpilot_bf_inoc_scaffold_32_curated_169
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206659..207261)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CE063
Uncharacterized protein {ECO:0000313|EMBL:KFN47556.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
acetyltransferase (GNAT) family protein
SCNpilot_bf_inoc_scaffold_32_curated_170
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207258..209078)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PQ99_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX13752.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_171
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209237..210121
DNA (885bp) protein (295aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A88
protein involved in catabolism of external DNA
SCNpilot_bf_inoc_scaffold_32_curated_172
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210195..211229
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003688012
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_32_curated_173
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211277..212860
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E3B7E
Uncharacterized protein {ECO:0000313|EMBL:KFN41790.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
SCNpilot_bf_inoc_scaffold_32_curated_174
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212956..214371
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CECB7
Uncharacterized protein {ECO:0000313|EMBL:KGF80716.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_175
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214418..215152
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000346DF1B
ATP-binding transport protein NatA {ECO:0000313|EMBL:KFC71924.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ABC-type Na+ transport system, ATPase component
SCNpilot_bf_inoc_scaffold_32_curated_176
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215149..216330
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034D8816
Uncharacterized protein {ECO:0000313|EMBL:KGF80714.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
sodium ABC transporter permease; K09696 sodium transport system permease protein
SCNpilot_bf_inoc_scaffold_32_curated_177
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216323..216835
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003480E90
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU81035.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
igma-70 family RNA polymerase sigma factor
SCNpilot_bf_inoc_scaffold_32_curated_178
unknown

Not on your lists

216832..217413
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_179
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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217558..218124
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ECF subfamily RNA polymerase sigma-24 factor
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_32_curated_180
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218126..220483
DNA (2358bp) protein (786aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003664F54
Uncharacterized protein {ECO:0000313|EMBL:EYR69873.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
serine/threonine protein kinase
Displaying items 151-180 of 352 in total

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