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SCNpilot_bf_inoc_scaffold_216_curated

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_216_curated_1
unknown

Not on your lists

2..1054
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034872AE
SCNpilot_bf_inoc_scaffold_216_curated_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2381..3484
DNA (1104bp) protein (368aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Mariprofundus ferrooxydans RepID=UPI0003815087
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_216_curated_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3701..4258)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39357.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_bf_inoc_scaffold_216_curated_4
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4844..5431)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MRI6_BDEBA
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_bf_inoc_scaffold_216_curated_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5412..6173)
DNA (762bp) protein (254aa)
Putative cytochrome b n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MRI7_BDEBA
cytochrome b
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_216_curated_6
unknown

Not on your lists

comp(6178..6972)
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_216_curated_7
unknown

Not on your lists

7005..8339
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000370BF03
SCNpilot_bf_inoc_scaffold_216_curated_8
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8528..9397
DNA (870bp) protein (290aa)
sugar-binding protein n=1 Tax=Dickeya zeae RepID=UPI0002F75485
Sugar-binding protein {ECO:0000313|EMBL:AJC67077.1}; TaxID=1427366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae EC1.;"
Necrosis inducing protein
SCNpilot_bf_inoc_scaffold_216_curated_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9741..12233)
DNA (2493bp) protein (831aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E40BCB
SCNpilot_bf_inoc_scaffold_216_curated_10
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12316..13056)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PJT2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFN42695.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_216_curated_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13079..14167)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKB5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGM55801.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_216_curated_12
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14460..15260)
DNA (801bp) protein (267aa)
Putative membrane protein id=2536496 bin=GWF1_Xanthomonadales_69_6 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_216_curated_13
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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15453..16556
DNA (1104bp) protein (368aa)
Transcriptional regulator, AraC family id=2536498 bin=GWF1_Xanthomonadales_69_6 species=Maricaulis maris genus=Maricaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
AraC family transcriptional regulator
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_216_curated_14
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16965..17339
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000381F1EF
Uncharacterized protein {ECO:0000313|EMBL:KKA42498.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_216_curated_15
unknown

Not on your lists

17468..17731
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_216_curated_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17811..18413
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDH43756.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_216_curated_17
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18428..19138
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SJV4_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC29070.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCNpilot_bf_inoc_scaffold_216_curated_18
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..19746
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN45330.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
DinB family protein id=2850551 bin=GWF1_Xanthomonadales_69_6 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DinB family protein
SCNpilot_bf_inoc_scaffold_216_curated_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19772..20158
DNA (387bp) protein (129aa)
Cupin domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMX2_9BURK
Cupin domain-containing protein {ECO:0000313|EMBL:EHR70742.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cupin domain protein
SCNpilot_bf_inoc_scaffold_216_curated_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20618..21718)
DNA (1101bp) protein (367aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Dyella japonica RepID=UPI0002F213BB
SCNpilot_bf_inoc_scaffold_216_curated_21
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21802..22866)
DNA (1065bp) protein (355aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXA6_9GAMM
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SCNpilot_bf_inoc_scaffold_216_curated_22
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22892..25096)
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037879B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN46631.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
SCNpilot_bf_inoc_scaffold_216_curated_23
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(25194..27314)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AQ35_9ACTN
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
SCNpilot_bf_inoc_scaffold_216_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27374..27976)
DNA (603bp) protein (201aa)
Two component LuxR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E7_9GAMM
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIL94688.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_bf_inoc_scaffold_216_curated_25
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28008..29162)
DNA (1155bp) protein (385aa)
two-component system sensor protein; K07778 two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003798498
Histidine kinase {ECO:0000313|EMBL:AJC47607.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_bf_inoc_scaffold_216_curated_26
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29191..29955)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003639E82
ABC transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_216_curated_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29957..30847)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366BB46
ABC transporter ATPase {ECO:0000313|EMBL:KGI78755.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type multidrug transport system, ATPase component
SCNpilot_bf_inoc_scaffold_216_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31111..32613
DNA (1503bp) protein (501aa)
ornithine/acetylornithine aminotransferase (EC:2.6.1.36)
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:AGG88216.1}; EC=2.6.1.36 {ECO:0000313|EMBL:AGG88216.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ornithine/acetylornithine aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNR7_9GAMM
SCNpilot_bf_inoc_scaffold_216_curated_29
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32877..33722
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6A553
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_216_curated_30
unknown

Not on your lists

34717..35832
DNA (1116bp) protein (372aa)

This feature has no annotations

Displaying items 1-30 of 69 in total

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