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SCNpilot_bf_inoc_scaffold_306_curated

Search features with annotation key words

Displaying items 31-60 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_306_curated_31
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35758..36639
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPH9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGM50980.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
SCNpilot_bf_inoc_scaffold_306_curated_32
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36698..37735)
DNA (1038bp) protein (346aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC2_9GAMM
Phospholipase {ECO:0000313|EMBL:EIM03064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane phospholipase A
SCNpilot_bf_inoc_scaffold_306_curated_33
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37883..40117
DNA (2235bp) protein (745aa)
dipeptidyl aminopeptidase/acylaminoacyl peptidase; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037754D1
Peptidase S9 {ECO:0000313|EMBL:GAN45124.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_306_curated_34
unknown

Not on your lists

40150..40563
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_35
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40594..41451)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003778CFB
Pirin {ECO:0000313|EMBL:EIL90840.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Pirin-related protein
SCNpilot_bf_inoc_scaffold_306_curated_36
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(41649..42176)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F03AA
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG93514.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_bf_inoc_scaffold_306_curated_37
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42212..44542)
DNA (2331bp) protein (777aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
serine/threonine protein kinase n=1 Tax=Salisaeta longa RepID=UPI0003B639AE
Uncharacterized protein {ECO:0000313|EMBL:EYR69873.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_306_curated_38
unknown

Not on your lists

comp(44585..46129)
DNA (1545bp) protein (515aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_39
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46291..46962)
DNA (672bp) protein (224aa)
YecA family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45122.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
yecA family protein
SCNpilot_bf_inoc_scaffold_306_curated_40
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46959..47729)
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLU1_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL88182.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_bf_inoc_scaffold_306_curated_41
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47848..49890)
DNA (2043bp) protein (681aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE4_9GAMM
Oligopeptidase A {ECO:0000313|EMBL:GAN45120.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Zn-dependent oligopeptidase
SCNpilot_bf_inoc_scaffold_306_curated_42
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49998..51773
DNA (1776bp) protein (592aa)
cyclic nucleotide-binding protein (EC:3.1.1.5); K07001 NTE family protein
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003771C35
Uncharacterized protein {ECO:0000313|EMBL:GAN45119.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_306_curated_43
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51888..53000
DNA (1113bp) protein (371aa)
beta-lactamase-like hydrolase (EC:3.5.-.-)
Beta-lactamase-like hydrolase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H1I8_XANCT
Beta-lactamase {ECO:0000313|EMBL:EYR68782.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_306_curated_44
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53001..54587)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU40_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EYR68781.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_306_curated_45
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54617..56029)
DNA (1413bp) protein (471aa)
aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
Coniferyl aldehyde dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1C9V3_9ZZZZ
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_306_curated_46
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56224..56748
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037866EA
Carbonic anhydrase {ECO:0000313|EMBL:GAN45117.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_306_curated_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56842..57384
DNA (543bp) protein (181aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y9_9GAMM
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL95230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_bf_inoc_scaffold_306_curated_48
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57455..60217
DNA (2763bp) protein (921aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z0_9GAMM
Serine/threonine protein kinase {ECO:0000313|EMBL:EIL95231.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_306_curated_49
unknown

Not on your lists

60307..62109
DNA (1803bp) protein (601aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_50
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62397..64736
DNA (2340bp) protein (780aa)
membrane protein n=1 Tax=Salinispora arenicola RepID=UPI00036E71CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV99445.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
SCNpilot_bf_inoc_scaffold_306_curated_51
unknown

Not on your lists

comp(65140..65253)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_52
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65304..65933)
DNA (630bp) protein (210aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VSE0_DESAO
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ADU64283.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
SCNpilot_bf_inoc_scaffold_306_curated_53
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66125..67714)
DNA (1590bp) protein (530aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Caulobacter sp. AP07 RepID=J2PDG3_9CAUL
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL25272.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_bf_inoc_scaffold_306_curated_54
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67791..68384
DNA (594bp) protein (198aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N5_9GAMM
transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_306_curated_55
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68419..69579
DNA (1161bp) protein (387aa)
Membrane fusion protein family auxiliary transport protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA1_9GAMM
Membrane fusion protein family auxiliary transport protein {ECO:0000313|EMBL:EIM02343.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
SCNpilot_bf_inoc_scaffold_306_curated_56
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69610..70308
DNA (699bp) protein (233aa)
Short-chain dehydrogenase n=3 Tax=Amycolatopsis mediterranei RepID=D8I6X8_AMYMU
Short-chain dehydrogenase {ECO:0000313|EMBL:AKF82762.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
short chain dehydrogenase
SCNpilot_bf_inoc_scaffold_306_curated_57
unknown

Not on your lists

comp(70426..70593)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_58
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70659..71318)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FCFC8
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_306_curated_59
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71311..71682)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E734D
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_306_curated_60
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71743..73245)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003675E6E
beta-lactamase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Displaying items 31-60 of 80 in total

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