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SCNpilot_bf_inoc_scaffold_306_curated

Search features with annotation key words

Displaying items 61-80 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_306_curated_61
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(73431..73724)
DNA (294bp) protein (98aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNA6_9GAMM
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGG90990.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_306_curated_62
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(73721..74563)
DNA (843bp) protein (281aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
shikimate dehydrogenase (EC:1.1.1.25)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037230C6
SCNpilot_bf_inoc_scaffold_306_curated_63
Pseudoxanthomonas mexicana, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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74761..76818
DNA (2058bp) protein (686aa)
Dipeptidyl aminopeptidase BIII {ECO:0000312|EMBL:BAO18428.1}; Short=DAP BIII {ECO:0000303|PubMed:8892831};; EC=3.4.14.- {ECO:0000269|PubMed:8892831};; Flags: Precursor;; TaxID=128785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas mexicana.;"
prolyl oligopeptidase (EC:3.4.21.26)
Dipeptidyl aminopeptidase BIII n=1 Tax=Pseudoxanthomonas mexicana RepID=V5YMB3_9GAMM
SCNpilot_bf_inoc_scaffold_306_curated_64
unknown

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comp(76875..77168)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_65
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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77413..78183
DNA (771bp) protein (257aa)
Peptidase C26 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ6_9BURK
peptidase C26; K07010 putative glutamine amidotransferase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_306_curated_66
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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78180..80426
DNA (2247bp) protein (749aa)
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein n=1 Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2XTS1_9PSED
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_bf_inoc_scaffold_306_curated_67
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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80423..81157
DNA (735bp) protein (245aa)
Putative methyltransferase n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3K4Q6_PSEPF
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:ABA77248.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;"
SCNpilot_bf_inoc_scaffold_306_curated_68
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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81145..81909
DNA (765bp) protein (255aa)
Transferase, putative n=1 Tax=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) RepID=A0KQM4_AERHH
transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_bf_inoc_scaffold_306_curated_69
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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81906..82406
DNA (501bp) protein (167aa)
adenylylsulfate kinase; K00860 adenylylsulfate kinase [EC:2.7.1.25]
Adenylylsulfate kinase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DN36_DESVM
Adenylylsulfate kinase {ECO:0000313|EMBL:ACL06980.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
SCNpilot_bf_inoc_scaffold_306_curated_70
unknown

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82399..83370
DNA (972bp) protein (324aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_71
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(83475..88379)
DNA (4905bp) protein (1635aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F4F12
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45540.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_306_curated_72
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88728..89336
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000315819B
Membrane protein {ECO:0000313|EMBL:AHX14788.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_306_curated_73
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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89388..90473
DNA (1086bp) protein (362aa)
radical SAM protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3E7B8
Uncharacterized protein {ECO:0000313|EMBL:KFN43894.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
DNA repair photolyase
SCNpilot_bf_inoc_scaffold_306_curated_74
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90500..91006)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM52641.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCNpilot_bf_inoc_scaffold_306_curated_75
unknown

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comp(91281..91865)
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_76
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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comp(92024..93292)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X3M4_OXAFO
pesticin domain protein
Pesticin domain protein {ECO:0000313|EMBL:EFC42738.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
SCNpilot_bf_inoc_scaffold_306_curated_77
unknown

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comp(93285..93695)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_306_curated_78
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(93701..94288)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQ20_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY59790.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_bf_inoc_scaffold_306_curated_79
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94285..94620)
DNA (336bp) protein (112aa)
PAAR repeat-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2W1_ACIAP
PAAR repeat-containing protein
PAAR repeat-containing protein {ECO:0000313|EMBL:ADX44220.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_306_curated_80
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(94667..95623)
DNA (957bp) protein (319aa)
Type VI secretion system Vgr family protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2W2_ACIAP
ImpA family type VI secretion-associated protein
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ADX44221.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Displaying items 61-80 of 80 in total

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