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SCNpilot_bf_inoc_scaffold_16_curated_211

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(264002..264481)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78. similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 157.0
  • Bit_score: 268
  • Evalue 5.60e-69
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 157.0
  • Bit_score: 252
  • Evalue 1.20e-64
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=2515668 bin=GWF1_Rhodobacteraceae_65_7 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 157.0
  • Bit_score: 260
  • Evalue 1.10e-66

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCGAATGGGACAGGGTTTCGATGTGCATGCGTTCGGGCCCGGCGATCATGTCGTGCTCGGCGGCGTCCGCGTGCCGCACAGCCATGGCGTCGTCGCTCATTCCGACGGCGACGTGGTCATCCACGCGCTCTGCGATGCGCTGCTCGGCGCGCTCGCGCTCGGCGACATCGGTACGCATTTCCCACCGAGCGACGAGCGCTGGCGCGGCGCGGACAGCCGCGTGTTCCTGCGCCATTGCCGCGAGCTCCTGCGCGAGCGCGGCTACGTGCTCGGCAATGCCGACGTGACCGTGATCGCCGAACGGCCCAAGGTCGGGCCGCATGCGGCGGCCATGCGCGAATGCCTCGCGGCCGATCTCGGCTGCGCGGTCGATGCGATCAGCGTCAAGGCCACGACCAGCGAACGCCTGGGCTTTACCGGGCGCGGCGAAGGCATCGCCGCGATGGCCGTCGCGCTGCTGCAGCGGAGCGGCGCATGA
PROTEIN sequence
Length: 160
MRMGQGFDVHAFGPGDHVVLGGVRVPHSHGVVAHSDGDVVIHALCDALLGALALGDIGTHFPPSDERWRGADSRVFLRHCRELLRERGYVLGNADVTVIAERPKVGPHAAAMRECLAADLGCAVDAISVKATTSERLGFTGRGEGIAAMAVALLQRSGA*