ggKbase home page

SCNpilot_bf_inoc_scaffold_16_curated_254

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(316863..317228)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein PilZ {ECO:0000313|EMBL:KGQ18942.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 117.0
  • Bit_score: 186
  • Evalue 1.60e-44
Type IV fimbriae assembly protein id=2697548 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 116.0
  • Bit_score: 181
  • Evalue 3.80e-43
putative pilus biogenesis protein PilZ; K02676 type IV pilus assembly protein PilZ similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 111.0
  • Bit_score: 174
  • Evalue 2.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCAACCCCGGCAATGGGCGGCATGCCGCGGCAGGGCATCCTGTCGCTGGCGATCAAGGACCGCGGCGCGCTGTACAACGCCTACATGCCGTTCGTGAAGCATGGCGGCCTGTTCGTGCCGACCGCCAAGCGTTATTCGCTCGGCGACGAAGTGTTCATCCTGCTGACCCTGATGGAAGAAAAGGATCGCCTGCCGGTCGCCGGCAAGGTGGTCTGGATCACGCCGCCGGGTGCCCAGGGCAATCGCACGGCCGGCATCGGCGTGCAGTTCAACGAGTCCGCCGACGGCGACGCCGCGCGGACCAAGATCGAGTCCATACTTGCCGGCATCCTCGGGTCGGACCGTCCGACCCATACGATGTGA
PROTEIN sequence
Length: 122
MATPAMGGMPRQGILSLAIKDRGALYNAYMPFVKHGGLFVPTAKRYSLGDEVFILLTLMEEKDRLPVAGKVVWITPPGAQGNRTAGIGVQFNESADGDAARTKIESILAGILGSDRPTHTM*