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SCNpilot_bf_inoc_scaffold_44_curated_59

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 80463..82838

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with winged-HTH domain n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8R9_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 27.0
  • Coverage: 842.0
  • Bit_score: 114
  • Evalue 3.70e-22
Transcriptional regulator {ECO:0000313|EMBL:KGQ17969.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 801.0
  • Bit_score: 380
  • Evalue 6.50e-102
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 27.0
  • Coverage: 842.0
  • Bit_score: 114
  • Evalue 1.10e-22

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2376
ATGATCTACGAGTTCGACCACTGGCGCGTCGACACGGCGCGGCGCGAAGTCTTGCGCGCCGGCGCGGCGGTCGCCTTGCCGCGGCGCGTGTTCGACCTCGTCGTCTACCTGATCGAGCAGCGCGAACGCGCGGTCGGCCGCGACGAACTCGTCGCGGCGGTGTGGGGCCGCGTCGACGTGGCCGACGTGCAGGTCAGCCAGCTGATCGCGCGGGCGCGGCGCCTGCTCGGCGACGATGCGCAGACCCAGGCGACGATACGCACGGTCAGCGGCTTCGGCTATCGCTGGATCATGCCGCTGCGGCCGGCCCTCGACGCGGCACCCGACGTTGCAACGGATTCCGCCGACACCGCGGAGCCGGCATCGCCGTCGCTCGCGCCGATCGCCGCAACCGGCGCTGCCGGCGCGGCGCCGCAGGCTCCGGCGCCTGACCGGGCGCCGGCCGGAACGGCCACGGCACCGCTCGCGGCGACCGCGTTCCGCCGCCGCCTCGCCCTGGGGCTCGTGTTCATCGCGGCGGCCGCGCTCGCCGTCGTGTTCGCGCTGCGGGCAGCCGACCGCCGTGCCGCACCGCCGGTGGCGCGCGCCGCGGCGGCCGATGCGATCGCCGTGCTGCCGCTGCAGGTCGAGGCGGATGCCGATGCCGGCTGGATGCAGCTGGGCCTCATGGATCTCGTCGCCGGCCGCCTGCGCGGCGCGGGGCTGGCGGTGCCGCCGAGCGACAGCGTGCTGGTCGCATTGCGTGCGCTGGATTCGGCGCCGGCCGGCAAGCGCCCGGTTTCCGACGCGCAGCGCCTGAATCCGATTCTCGGCACGCGCCGCCTCGTGCACGGCAGCGTGCGCCGGGTCGCGGCGGGCTGGCGCGTCGAACTCGAAGCGCCCGATCTGCAGGGCCGGCTGCGCCGCATCGAGACCGAGCGCGACGACCCGGTCGCCGCCGGCCGCGCCGCGGCGGACCTGCTGCTGGCCGCGCTCGGCCACGCGGTCGATCCCGGTGCCGAGGAGACGGAACCCGAGCTGCTGATACAGCGCAGCCAGGCAGCGATACTCGCGGGCCATTTCGATGCGGCGCAGGAAATTCTCGAGTCGGCCCCGCTGGCGCAGCGCGATGCGCCGCGCGTGCAGCTGCAGCGCGCGCAGATCGATTTCTATCGCGGCCGCCTCGACGCCGCCGCGCAGCAGCTCGACACGATTCTCGCCGGCGACCCGCCGGCGGAAGTGCGCGCCCGCGCATTGACCTCGCGCGGCATGCTGCTGCTGCGCCGCGGCGACTGCGCGGCGGCGCAGCAGTCCTTCGGCACGGCACTCACAGCGACTGGCGCGGTCGAGGCCACCGCGCTGGCCGGCCGCGGCCTCGCGCGCAGCTGCCGTGCCGAACACGCCGCTGCGATCGACGATCTCGGCCTCGCCCGGGTACGCCTGGAAGCCGCCGGCGACCGGCTCGGTGTGGCGCGCGTGGACAACTATCTCGCGATCGCCGATGCGAACCGCTACCGCCTGGAGCCGGCGCTCGCGCGTTTCGACGCGGCGCTGAGCGTCTACGAGGCGTTCGGCGTCGCCGACGCCCAGCGCGCCGCGCTCAGCGGGCTGCTCGATACGCACGTGCTGCTGCTGCGCTGGGCCGATGCCGGACGCGACGCGCAGCGCCTGGCCGCGCTGCGGCCGCGCATCGCCGACGCGGGCCAGGCTTCCGTCATCGACAGCGACCGCGCTCGCGCGCTGATCGGTCAGGGCCGCTATAGCGAGGCGGCCGGGCTGCTGCAGGCCGATCCCGGCGACGATCCGGCCGCGCAGCGCCATCGCGAGGCCGCCCGCGCCGAGCTGGCCTGGCGTCGCGGCCAGTTCGATGTCGCGCGCGTCGCGGCAACGCGCGCGCTCGACCGCTGGCCGGTGCGCGCCGACGAGGTCGCCCGCGCCTTCATGCTGCTGCTGCGCCAGCGCGCCGGCGGCGAACGCGTCGATCCGGACGCCGCAGCGAGCGGTGCCGGCGCCGGGCTCCCGCTGCTGCGGCTGGCCGCGGCCGAAGCGGCGTCCTCGCCGGCCGACGCCGAACGCCACTACCGCGCCGCGCTGGAGCAGGCCGACACCCTCGGACTGCCGGCCGTCGTCTCGGCGGTCACGGCCAGCTATGCGGGCTGGCTGCTCGGCCAGCGCCGCAGCGAGGAGGCGGCGGCGCTCAGCGGCCGCGTCGCGCTCTGGAGCGCCGCCGATTTCGACTGCGCCGTGCTGCGCCTGGCGCTGTTCCATGCCCGCGGCGACGTGGATGCCTGGGCCGCGGCGCTGGAGCAGGCCCGGGCGCTGGCCGGCGAGCGCCCGATTCCCGAGGTGCTGAACCGCCCGCCCGCGCCGGCGAAGGTGAGCGCCGTCACGTTCTGA
PROTEIN sequence
Length: 792
MIYEFDHWRVDTARREVLRAGAAVALPRRVFDLVVYLIEQRERAVGRDELVAAVWGRVDVADVQVSQLIARARRLLGDDAQTQATIRTVSGFGYRWIMPLRPALDAAPDVATDSADTAEPASPSLAPIAATGAAGAAPQAPAPDRAPAGTATAPLAATAFRRRLALGLVFIAAAALAVVFALRAADRRAAPPVARAAAADAIAVLPLQVEADADAGWMQLGLMDLVAGRLRGAGLAVPPSDSVLVALRALDSAPAGKRPVSDAQRLNPILGTRRLVHGSVRRVAAGWRVELEAPDLQGRLRRIETERDDPVAAGRAAADLLLAALGHAVDPGAEETEPELLIQRSQAAILAGHFDAAQEILESAPLAQRDAPRVQLQRAQIDFYRGRLDAAAQQLDTILAGDPPAEVRARALTSRGMLLLRRGDCAAAQQSFGTALTATGAVEATALAGRGLARSCRAEHAAAIDDLGLARVRLEAAGDRLGVARVDNYLAIADANRYRLEPALARFDAALSVYEAFGVADAQRAALSGLLDTHVLLLRWADAGRDAQRLAALRPRIADAGQASVIDSDRARALIGQGRYSEAAGLLQADPGDDPAAQRHREAARAELAWRRGQFDVARVAATRALDRWPVRADEVARAFMLLLRQRAGGERVDPDAAASGAGAGLPLLRLAAAEAASSPADAERHYRAALEQADTLGLPAVVSAVTASYAGWLLGQRRSEEAAALSGRVALWSAADFDCAVLRLALFHARGDVDAWAAALEQARALAGERPIPEVLNRPPAPAKVSAVTF*