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SCNpilot_bf_inoc_scaffold_44_curated_188

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(233378..233929)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMK0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 181.0
  • Bit_score: 215
  • Evalue 6.00e-53
RNA polymerase sigma factor {ECO:0000313|EMBL:EIL88441.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 181.0
  • Bit_score: 215
  • Evalue 8.50e-53
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 175.0
  • Bit_score: 128
  • Evalue 3.00e-27

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGTCAGATCACGCTCTTGCTGGAACAGGCTCACGGCGGCGACGAGGCCGCCTGGCAACAGGTCGTCGCCCTGCTCTACGACGATCTGCTGCGCCTGGCGCGCTGCGCCAATACCTCGGGCCGGCCCAACACCCTCAACGCGACCGCGCTCGTGCATGAGTGCTACCTGCGCATCGCCGCCGGCGGCGGCGAGGCCGGCATCGGCAACCGCTCGCATTTCCTCGCCCTGGCCGGGCGCGCCATGCGCCAGATCCTGGTCAACCACGCCCGCGACCGCATGGCCGCCAAGCGCGGCGGCGGCGCCGAACACACCACGCTGGACCCGAACGACCTCGCCGCGGACCGCGAGGCCGAGGAACTGCTGGGCGTGGAATCCGTGCTGGAACAACTGGGCAAGGAGGACGAGCGCCTGGTGCGCGTGGTCGACTGCCGCATCTTCGGCGGCCTGACCGAAGTGGAAACCGCCGAAGCGCTGCGCATGCCGCTGCGCTCGGTGCAACGCCTCTGGGCCCAGGCACGGCATCGCCTGCAGAACCTGCTGGCGGCGTGA
PROTEIN sequence
Length: 184
MSQITLLLEQAHGGDEAAWQQVVALLYDDLLRLARCANTSGRPNTLNATALVHECYLRIAAGGGEAGIGNRSHFLALAGRAMRQILVNHARDRMAAKRGGGAEHTTLDPNDLAADREAEELLGVESVLEQLGKEDERLVRVVDCRIFGGLTEVETAEALRMPLRSVQRLWAQARHRLQNLLAA*