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SCNpilot_bf_inoc_scaffold_69_curated_124

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(151574..151867)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; DNA-directed RNA polymerase subunit omega; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 97.0
  • Bit_score: 161
  • Evalue 5.90e-37
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 96.0
  • Bit_score: 152
  • Evalue 8.00e-35
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFQ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 154
  • Evalue 5.20e-35

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGGCTCGAGTAACCGTAGAAGACTGCCTGCAGGTCGTCGACAACCGCTTCGAACTGGTGCTGATGGCGACCAAGCGCGCGCGTCAGCTGGCCAAGGGCGCCGACTCCCTCGTCACCGCCGAAAACGACAAGCCCACCGTGCTCGCCCTGCGTGAGATCGCCGAAGGCAAGGTCGACAACGCGCTGATCGAACAGGTTGACAAGCTCGAACGCGAGCGCGCTGAACGAGAAGCCCTGGAATGGGCTGCCGCCGAAGTCGACGACGACCTCAAGGGCGGCGGCGACGATCTGTAA
PROTEIN sequence
Length: 98
MARVTVEDCLQVVDNRFELVLMATKRARQLAKGADSLVTAENDKPTVLALREIAEGKVDNALIEQVDKLERERAEREALEWAAAEVDDDLKGGGDDL*