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SCNpilot_bf_inoc_scaffold_42_curated_87

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(124073..124948)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003709E63 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 286.0
  • Bit_score: 430
  • Evalue 1.90e-117
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 282.0
  • Bit_score: 415
  • Evalue 8.80e-113
tRNA(Cytosine32)-2-thiocytidine synthetase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 282.0
  • Bit_score: 404
  • Evalue 2.10e-110

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGCAGTTCCGCCGCACGCAAGCAGGAAATCAACGCCAACAAGCTGGCCAAGCGGCTGCGCCGCCAGGTCGGCCAGGCCATCGCCGACTTCCGGATGATCGAGGCCGGCGACCGCATCATGGTCTGCCTGTCCGGCGGCAAGGATTCCTACACCTTGCTCGATCTGCTGCGCCAGCTGCAGGCCAAGGCGCCGGTGGATTTCGAGCTGCACGCGGTGCATCTGGACCAGAAGCAGCCGGGCTACGACCCGCGTACCCTGCCGGACTATCTCGAGTCCATCGGCATGCCGTACACCATCCTCGAGCAGGACACCTACAGCGTGGTCAAGCGCGTGGTGCCCGAGGGCCGCACGATGTGCAGCCTGTGCTCGCGTCTGCGCCGCGGCAATCTCTACGATCACGCGGCGGCCGAGGGCTTCACCAAGATCGCGCTGGGCCATCATCGCGACGACATCGTCGAGACCTTGTTCCTGAACCTGTTCCACCAGGCCAAGCTCAAGGCCATGCCGCCGAAGCTGCGCTCCGACGACGGCCGCAACGTCCTGATCCGGCCGCTGGCCTACTGCCGCGAGGACGACATCGCCGACTACGCCCAGGCGCGCAGCTTTCCGATCATGCCGTGCAATCTGTGCGGCTCGCAGGAGAACCTGCAGCGCAAGGCGATCAAGGCCATGCTCGGCGACTGGGAGCGCAGGTTTCCGGGTCGCATCGAAAACGTATTCCGCGCGATCGGCGACGTGTCGCCGTCGCAGCTGGCCGACCGCAACCTGTTCGATTTCGCCGCGCTGGGCCGGCGCAGCGAGCAGCCGCTCAGCGCCGGCGACTGGCTGCGCGGCGAGCCGGCCGACTCAGCTTCCGAGACAACCGCGGACTAG
PROTEIN sequence
Length: 292
MSSSAARKQEINANKLAKRLRRQVGQAIADFRMIEAGDRIMVCLSGGKDSYTLLDLLRQLQAKAPVDFELHAVHLDQKQPGYDPRTLPDYLESIGMPYTILEQDTYSVVKRVVPEGRTMCSLCSRLRRGNLYDHAAAEGFTKIALGHHRDDIVETLFLNLFHQAKLKAMPPKLRSDDGRNVLIRPLAYCREDDIADYAQARSFPIMPCNLCGSQENLQRKAIKAMLGDWERRFPGRIENVFRAIGDVSPSQLADRNLFDFAALGRRSEQPLSAGDWLRGEPADSASETTAD*