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SCNpilot_bf_inoc_scaffold_42_curated_178

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 225495..226055

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000365F858 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 158.0
  • Bit_score: 155
  • Evalue 7.50e-35
Uncharacterized protein {ECO:0000313|EMBL:AJP72111.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 156.0
  • Bit_score: 165
  • Evalue 6.00e-38
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 154.0
  • Bit_score: 139
  • Evalue 1.00e-30

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGAAGCAAGAACGAACGCGAGCACGACAGGACCGACCGGCTGCTGGCCGAGTGGCAGGCCGAGCGTCCGGAGCTCGACGCCTCCGCCATGGCCGTCGTGGGCCGGCTGCTGAGCATCGGGCGTCAGCTCGAAGCCCGCGCCAACGCCGCACTGCGGCCGCTCGGCCTGCACTACACGGATCTCGACGTACTGGCGACGCTTCGCCGGGGAGGGCGCCCCTACCGGCGCACGCCGACCGAATTGCGCGATTCGGTGCTGATCACCTCGGGCGCGATGACCGCCTGCCTCGACCGCCTGGAGCGCAACGGCCTGATCGAGCGCATCGCCGATCCGAACGATCGCCGCTCCAGCGCCGCCGCATTGACGGGCGAAGGACGCAAGCTGATCGACAAGGCCATTGCGGTACGCTTCGGCGAAGCCGCAGACGCGCTCTCGGGCCTGTCCGCCGCGGAATGCGCGCGGCTCGCGGCGCTGCTGAAGAAACTGGGCCGGACCTTGGGTCAGCCTGGCGAGGAGGCCGGCAGCATGCCAGCGCCTTCCGACCGTTCCGGAGGATGA
PROTEIN sequence
Length: 187
MRSKNEREHDRTDRLLAEWQAERPELDASAMAVVGRLLSIGRQLEARANAALRPLGLHYTDLDVLATLRRGGRPYRRTPTELRDSVLITSGAMTACLDRLERNGLIERIADPNDRRSSAAALTGEGRKLIDKAIAVRFGEAADALSGLSAAECARLAALLKKLGRTLGQPGEEAGSMPAPSDRSGG*