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SCNpilot_bf_inoc_scaffold_42_curated

Search features with annotation key words

Displaying items 151-180 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_42_curated_151
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195625..196929)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B664B3
Uncharacterized protein {ECO:0000313|EMBL:KFN44143.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_152
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196926..197909)
DNA (984bp) protein (328aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
magnesium chelatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B63C8E
Magnesium chelatase {ECO:0000313|EMBL:KFN44142.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_42_curated_153
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197906..199099)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3F93B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_42_curated_154
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199096..200673)
DNA (1578bp) protein (526aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2V2_XANCT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_42_curated_155
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200663..201661)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH4_9GAMM
uncharacterized membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_42_curated_156
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201669..202283)
DNA (615bp) protein (205aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B38E0C
RDD domain containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_42_curated_157
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202370..202882)
DNA (513bp) protein (171aa)
Putative membrane protein/domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKM0_9GAMM
putative membrane protein/domain protein
Putative membrane protein/domain protein {ECO:0000313|EMBL:AGG90291.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_42_curated_158
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202958..203704)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A590BC
Uncharacterized protein {ECO:0000313|EMBL:KGM51780.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
rhodanese superfamily protein; K07146 UPF0176 protein
SCNpilot_bf_inoc_scaffold_42_curated_159
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203972..205261)
DNA (1290bp) protein (430aa)
Permease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) PF4_AZOSU">RepID=G8QPF4_AZOSU
permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_42_curated_160
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205751..206338
DNA (588bp) protein (196aa)
Cold-shock DNA-binding domain protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRE3_THISH
cold-shock DNA-binding domain-containing protein
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_bf_inoc_scaffold_42_curated_161
unknown

Not on your lists

206406..206822
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_42_curated_162
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(206921..208882)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ68_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03614.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_bf_inoc_scaffold_42_curated_163
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209267..209611
DNA (345bp) protein (115aa)
Endoribonuclease l-psp protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GBD1_XANCT
Endoribonuclease l-psp protein {ECO:0000313|EMBL:ELQ02913.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
endoribonuclease l-psp protein
SCNpilot_bf_inoc_scaffold_42_curated_164
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209667..211532)
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000381D49B
Uncharacterized protein {ECO:0000313|EMBL:GAN45963.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
PDZ/DHR/GLGF domain-containing protein
SCNpilot_bf_inoc_scaffold_42_curated_165
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211637..212251
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN47479.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
id=2493346 bin=GWF1_Xanthomonadales_69_6 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_bf_inoc_scaffold_42_curated_166
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212819..214114)
DNA (1296bp) protein (432aa)
peptidase; K01436 amidohydrolase [EC:3.5.1.-]
N-acyl-L-amino acid amidohydrolase n=1 Tax=Dyella japonica RepID=UPI000318E13B
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:AHX14961.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_bf_inoc_scaffold_42_curated_167
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214243..215328)
DNA (1086bp) protein (362aa)
ATPase n=1 Tax=Dyella japonica RepID=UPI0002F4E00C
ATPase {ECO:0000313|EMBL:AIF46577.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative ATPase
SCNpilot_bf_inoc_scaffold_42_curated_168
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215330..216007)
DNA (678bp) protein (226aa)
Alpha/beta family hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB4_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:KGI79033.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative hydrolase of the alpha/beta superfamily
SCNpilot_bf_inoc_scaffold_42_curated_169
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

216313..218274
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7S6_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX04454.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_bf_inoc_scaffold_42_curated_170
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218386..218988
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_171
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219170..219700)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003800A8D
Cytochrome C {ECO:0000313|EMBL:GAN45938.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
cytochrome c5
SCNpilot_bf_inoc_scaffold_42_curated_172
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(220588..221385)
DNA (798bp) protein (266aa)
Transcriptional regulator, AraC family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VWA3_POLNA
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG93463.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
helix-turn-helix domain-containing protein
SCNpilot_bf_inoc_scaffold_42_curated_173
unknown

Not on your lists

221539..222261
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_42_curated_174
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

222265..222708
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1I2_CALAS
Auxin-binding protein {ECO:0000313|EMBL:AHG89383.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_175
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222717..224003
DNA (1287bp) protein (429aa)
Cytochrome c551 peroxidase {ECO:0000313|EMBL:EYD74269.1}; EC=1.11.1.5 {ECO:0000313|EMBL:EYD74269.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
di-heme cytochrome c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Di-heme cytochrome C peroxidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST6_9RHIZ
SCNpilot_bf_inoc_scaffold_42_curated_176
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224000..224347
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Marinobacter RepID=H8W7K2_MARHY
Uncharacterized protein {ECO:0000313|EMBL:KFN46193.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_177
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224450..224887)
DNA (438bp) protein (146aa)
Abortive infection protein n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12MY4_SHEDO
abortive infection protein; K07052
Abortive infection protein {ECO:0000313|EMBL:ABE55192.1}; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).;"
SCNpilot_bf_inoc_scaffold_42_curated_178
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225495..226055
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000365F858
Uncharacterized protein {ECO:0000313|EMBL:AJP72111.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_42_curated_179
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226157..226753
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=D8NXG9_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA82421.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
SCNpilot_bf_inoc_scaffold_42_curated_180
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227308..230139
DNA (2832bp) protein (944aa)
Transcriptional regulatory protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QJH2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KGM52766.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
serine/threonine protein kinase
Displaying items 151-180 of 180 in total

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