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SCNpilot_bf_inoc_scaffold_42_curated

Search features with annotation key words

Displaying items 31-60 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_42_curated_31
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34331..35614)
DNA (1284bp) protein (428aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP4_9GAMM
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAN45146.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
acetyl-CoA acetyltransferase
SCNpilot_bf_inoc_scaffold_42_curated_32
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35685..36401
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D414C
Uncharacterized protein {ECO:0000313|EMBL:KFN50839.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_33
unknown

Not on your lists

comp(36545..37672)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CE81E
SCNpilot_bf_inoc_scaffold_42_curated_34
unknown

Not on your lists

comp(37680..38027)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_42_curated_35
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38112..39536)
DNA (1425bp) protein (475aa)
glutamate synthase small subunit family protein; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase subunit beta n=1 Tax=Dyella ginsengisoli RepID=UPI00034711F9
Glutamate synthase small subunit family protein, proteobacterial {ECO:0000313|EMBL:AFC87327.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_bf_inoc_scaffold_42_curated_36
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39533..43990)
DNA (4458bp) protein (1486aa)
Glutamate synthase subunit alpha {ECO:0000313|EMBL:EIM02705.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EIM02705.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0573
glutamate synthase family protein
SCNpilot_bf_inoc_scaffold_42_curated_37
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44584..45792
DNA (1209bp) protein (403aa)
diguanylate phosphodiesterase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B637CF
Uncharacterized protein {ECO:0000313|EMBL:GAN45578.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator receiver/diguanylate phosphodiesterase
SCNpilot_bf_inoc_scaffold_42_curated_38
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45789..48167
DNA (2379bp) protein (793aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3D265
Uncharacterized protein {ECO:0000313|EMBL:KFN44236.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_42_curated_39
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48601..48939)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR92_9GAMM
nitrogen regulatory protein PII
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_42_curated_40
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49102..49929
DNA (828bp) protein (276aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Acidovorax sp. CF316 RepID=J1EIT1_9BURK
AraC family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_bf_inoc_scaffold_42_curated_41
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49959..50351
DNA (393bp) protein (131aa)
Lactoylglutathione lyase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P139_9DELT
Glyoxalase {ECO:0000313|EMBL:KFA93576.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_bf_inoc_scaffold_42_curated_42
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50720..50977
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71B41
Uncharacterized protein {ECO:0000313|EMBL:KFN43966.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein; K09806 hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_43
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

51681..52304
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003734B33
Uncharacterized protein {ECO:0000313|EMBL:EJG08371.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_44
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

52309..53100
DNA (792bp) protein (264aa)
N-acetylmuramoyl-L-alanine amidase CwlA (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Paenibacillus elgii RepID=UPI000248D8B7
Uncharacterized protein {ECO:0000313|EMBL:EOO44478.1}; TaxID=1053174 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1X2-2.;"
SCNpilot_bf_inoc_scaffold_42_curated_45
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53191..54840
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00035EB3C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF01812.1}; TaxID=715451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas sp. (strain SN2).;"
SCNpilot_bf_inoc_scaffold_42_curated_46
unknown

Not on your lists

54847..55992
DNA (1146bp) protein (382aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_42_curated_47
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56203..58035
DNA (1833bp) protein (611aa)
Mg chelatase, subunit ChlI n=2 Tax=Burkholderia RepID=F2LE45_BURGS
Magnesium chelatase {ECO:0000313|EMBL:KGE08435.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
SCNpilot_bf_inoc_scaffold_42_curated_48
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58393..62385)
DNA (3993bp) protein (1331aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNC0_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV24713.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_bf_inoc_scaffold_42_curated_49
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62787..63746)
DNA (960bp) protein (320aa)
LysR family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3AAA1
Uncharacterized protein {ECO:0000313|EMBL:KFN47469.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
LysR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_42_curated_50
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64069..64779
DNA (711bp) protein (237aa)
short-chain dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000372C1A5
Short-chain dehydrogenase {ECO:0000313|EMBL:EYR69766.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative short chain dehydrogenase
SCNpilot_bf_inoc_scaffold_42_curated_51
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64801..66009
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTL3_PSEUU
Acriflavin resistance protein AcrA {ECO:0000313|EMBL:KGM57626.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
RND family efflux transporter MFP subunit
SCNpilot_bf_inoc_scaffold_42_curated_52
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66196..69363
DNA (3168bp) protein (1056aa)
transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B76FF1
Transporter {ECO:0000313|EMBL:KFN43935.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
RND multidrug efflux transporter MexF; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_bf_inoc_scaffold_42_curated_53
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69508..69975)
DNA (468bp) protein (156aa)
OmpA/MotB domain-containing protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AFEF
Flagellar motor protein MotB {ECO:0000313|EMBL:AHX13907.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane protein/peptidoglycan-associated (lipo)protein; K03286 OmpA-OmpF porin, OOP family
SCNpilot_bf_inoc_scaffold_42_curated_54
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69987..71600)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WTL5_RHOS5
Ankyrin repeat-containing protein {ECO:0000313|EMBL:KCZ85825.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_55
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71732..73096
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2U8_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:EYR65719.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_56
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73089..73772
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2U9_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:EYR65718.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_57
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73765..76587
DNA (2823bp) protein (941aa)
RecF/RecN/SMC N-terminal domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2V0_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:EYR65717.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RecF/RecN/SMC N-terminal domain-containing protein
SCNpilot_bf_inoc_scaffold_42_curated_58
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76584..77846
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71360.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_42_curated_59
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77915..78511
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB8_9GAMM
Methylase {ECO:0000313|EMBL:KGM54036.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative S-adenosylmethionine-dependent methyltransferase
SCNpilot_bf_inoc_scaffold_42_curated_60
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

78860..80905
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0N5_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98822.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying items 31-60 of 180 in total

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