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SCNpilot_BF_INOC_scaffold_530_curated

Search features with annotation key words

Displaying items 91-100 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_530_curated_91
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(79275..80861)
DNA (1587bp) protein (529aa)
Lipase domain protein id=3191398 bin=GWF2_Clostridiales_38_85 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
cellulose-binding family II
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_530_curated_92
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(80978..82375)
DNA (1398bp) protein (466aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QWG5_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK43077.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
AraC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_530_curated_93
unknown

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comp(82411..82797)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_curated_94
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(82975..83955)
DNA (981bp) protein (327aa)
Nucleoside ABC transporter membrane protein n=2 Tax=Roseburia RepID=D4KZM9_9FIRM rbh
nucleoside ABC transporter membrane protein rbh
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CDA57477.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
SCNpilot_BF_INOC_scaffold_530_curated_95
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(83952..85067)
DNA (1116bp) protein (372aa)
Nucleoside ABC transporter membrane protein n=5 Tax=Roseburia RepID=D4KN39_9FIRM rbh
nucleoside ABC transporter membrane protein rbh
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CBL12818.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
SCNpilot_BF_INOC_scaffold_530_curated_96
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(85060..86727)
DNA (1668bp) protein (556aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17) rbh
ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXM3_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG92644.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
SCNpilot_BF_INOC_scaffold_530_curated_97
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(86796..87818)
DNA (1023bp) protein (341aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XY72_9FIRM rbh
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:EHQ91282.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
nucleoside-binding protein rbh
SCNpilot_BF_INOC_scaffold_530_curated_98
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88482..89057)
DNA (576bp) protein (192aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Xanthine phosphoribosyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3A7_ETHHY
xanthine phosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_530_curated_99
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(89246..91228)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003652DD3 rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:CCH51631.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
alpha-L-rhamnosidase rbh
SCNpilot_BF_INOC_scaffold_530_curated_100
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(91681..91959)
DNA (279bp) protein (93aa)
YxjI n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY47_9FIRM
YxjI {ECO:0000313|EMBL:CDB41945.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
Displaying items 91-100 of 100 in total

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