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RTP_09252017_15_scaffold_24

Search features with annotation key words

Displaying items 61-90 of 525 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_15_scaffold_24_61
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68084..69250)
DNA (1167bp) protein (389aa)
Oxidoreductase domain protein id=4974965 bin=GWA2_Flavobacterium_35_26 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Oxidoreductase {ECO:0000313|EMBL:KIA86732.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
oxidoreductase domain-containing protein
RTP_09252017_15_scaffold_24_62
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

69429..70337
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036415AB
hydroxypyruvate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_63
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

70384..72063
DNA (1680bp) protein (560aa)
GMC family oxidoreductase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B65EF6
GMC family oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_64
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

72086..72652
DNA (567bp) protein (189aa)
twin-arginine translocation pathway signal protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4A752
Uncharacterized protein {ECO:0000313|EMBL:GAO44232.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
twin-arginine translocation pathway signal
RTP_09252017_15_scaffold_24_65
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

72730..73599
DNA (870bp) protein (290aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB93_NIAKG
xylose isomerase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_66
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(73684..74850)
DNA (1167bp) protein (389aa)
Isopenicillin-N epimerase (EC:5.1.1.17)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031952A2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_67
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(74860..76308)
DNA (1449bp) protein (483aa)
Inositol 2-dehydrogenase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NV95_9BACT
dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_68
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

76460..77827
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E73E4
aldehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_69
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

77870..78526
DNA (657bp) protein (219aa)
glutathione peroxidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5B72A
glutathione peroxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_70
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78516..79556)
DNA (1041bp) protein (347aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NifR3 family TIM-barrel protein n=1 Tax=Niabella aurantiaca RepID=UPI000380578A
NifR3 family TIM-barrel protein
RTP_09252017_15_scaffold_24_71
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

79620..80519
DNA (900bp) protein (300aa)
Abortive infection protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV65_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_72
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80509..81417
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377D893
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:KIC92154.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphatidate cytidylyltransferase
RTP_09252017_15_scaffold_24_73
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

81390..82103
DNA (714bp) protein (238aa)
Phosphatidylserine decarboxylase related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ2_NIAKG
phosphatidylserine decarboxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_74
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(82119..82814)
DNA (696bp) protein (232aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ3_NIAKG
HAD superfamily hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_75
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

82892..83590
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ4_NIAKG
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC92166.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
short-chain dehydrogenase/reductase SDR
RTP_09252017_15_scaffold_24_76
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(83594..83905)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1M180_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB61166.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
RTP_09252017_15_scaffold_24_77
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(83916..84695)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003829841
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_78
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(84695..85846)
DNA (1152bp) protein (384aa)
Cystathionine gamma-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE8_NIAKG
cystathionine gamma-lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_79
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(85858..86529)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B58B25
putative integral membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_80
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

86636..87610
DNA (975bp) protein (325aa)
Homospermidine synthase (Spermidine-specific) n=1 Tax=Niabella soli DSM 19437 RepID=H1NRC2_9SPHI
deoxyhypusine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_81
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(87702..89156)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036398EB
peptidase M28
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_82
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(89219..89671)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AE5C6
ribose 5-phosphate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_83
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(89716..90567)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D5B42
Sec-independent protein translocase TatC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_84
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(90639..91874)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E89B8
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_85
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(91903..92892)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_86
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(92903..93493)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_87
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(93486..94871)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644115
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_88
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(94846..95571)
DNA (726bp) protein (242aa)
Type III pantothenate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD3_NIAKG
putative Baf family transcriptional acitvator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_89
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

95676..96551
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D73FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_90
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

96552..97454
DNA (903bp) protein (301aa)
LAO/AO transport system ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSP1_9SPHI
transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 61-90 of 525 in total

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