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RTP_09252017_15_scaffold_24

Search features with annotation key words

Displaying items 31-60 of 525 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_15_scaffold_24_31
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(42757..43845)
DNA (1089bp) protein (363aa)
Selenide, water dikinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU67_9SPHI
Selenide, water dikinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_32
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43827..44486)
DNA (660bp) protein (220aa)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY3_CHIPD
biotin--acetyl-CoA-carboxylase ligase
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ACU57966.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
RTP_09252017_15_scaffold_24_33
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

44549..44953
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367A469
iojap family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_34
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

45021..47123
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003817E86
membrane protease FtsH catalytic subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_35
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47131..47775
DNA (645bp) protein (215aa)
Lactate utilization protein B/C n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK8_NIAKG
lactate utilization protein B/C
Lactate utilization protein B/C {ECO:0000313|EMBL:AEW01996.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_09252017_15_scaffold_24_36
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47796..48554
DNA (759bp) protein (253aa)
Metallophosphoesterase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSM6_9SPHI
UDP-2,3-diacylglucosamine hydrolase
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:AHF16075.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_09252017_15_scaffold_24_37
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

48558..49622
DNA (1065bp) protein (355aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK4_NIAKG
mechanosensitive ion channel MscS
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_38
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(49647..50309)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003651308
MerR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_39
unknown

Not on your lists

50395..51441
DNA (1047bp) protein (349aa)

This feature has no annotations

RTP_09252017_15_scaffold_24_40
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

51493..51840
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B4C7D
gliding motility protein GldC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_41
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

51871..52323
DNA (453bp) protein (151aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Segetibacter koreensis RepID=UPI0003707846
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_42
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

52323..52850
DNA (528bp) protein (176aa)
Colicin V production protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG5_NIAKG
colicin V production protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_43
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

52910..53668
DNA (759bp) protein (253aa)
alpha/beta hydrolase n=1 Tax=Segetibacter koreensis RepID=UPI0003716B6F
alpha/beta hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_44
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

53677..54336
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037789C3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_45
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54329..55702
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DDF1A
Uncharacterized protein {ECO:0000313|EMBL:KIC94782.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
RTP_09252017_15_scaffold_24_46
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

55712..56593
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EC60C
inorganic polyphosphate/ATP-NAD kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_47
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

56596..57519
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003726DFF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_48
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57546..58286
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Isoprenyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THH1_NIAKG
undecaprenyl pyrophosphate synthase
RTP_09252017_15_scaffold_24_49
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

58384..61122
DNA (2739bp) protein (913aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003688C8F
surface antigen (D15)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_50
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

61157..61684
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377E83E
outer membrane chaperone Skp
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_51
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

61705..62307
DNA (603bp) protein (201aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_52
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

62390..63211
DNA (822bp) protein (274aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Glutamate racemase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECY7_RUNSL
glutamate racemase
RTP_09252017_15_scaffold_24_53
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


63353..63508
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THH6_NIAKG
50S ribosomal protein L34P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_54
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63666..64028
DNA (363bp) protein (121aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
Ribonuclease P protein component n=1 Tax=Imtechella halotolerans K1 RepID=I0WJG7_9FLAO
Ribonuclease P protein component
RTP_09252017_15_scaffold_24_55
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64015..64248
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F8937
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_09252017_15_scaffold_24_56
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64323..64928)
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Superoxide dismutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PML5_CHIPD
superoxide dismutase
RTP_09252017_15_scaffold_24_57
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65350..65790)
DNA (441bp) protein (147aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI6_NIAKG
CMP/dCMP deaminase zinc-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_58
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65808..66500)
DNA (693bp) protein (231aa)
Putative secreted glycosyl hydrolase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUV8_9FLAO
glycosyl hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_59
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(66538..66924)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZ22_9BACT
cytochrome C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_24_60
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(67000..68052)
DNA (1053bp) protein (351aa)
AP endonuclease 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA0_NIAKG
AP endonuclease 2 domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 31-60 of 525 in total

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