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RTP_02272018_0_2um_scaffold_118

Search features with annotation key words

Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_118_31
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30347..30985
DNA (639bp) protein (213aa)
thiol:disulfide interchange protein DsbA n=1 Tax=Thiobacillus denitrificans RepID=UPI000374F334
thiol:disulfide interchange protein DsbA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_32
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31028..31792
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003813AB6
short chain dehydrogenase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_33
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31820..32452
DNA (633bp) protein (211aa)
Two Component Transcriptional Regulator, LuxR family id=1348377 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LuxR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_34
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32470..34299)
DNA (1830bp) protein (610aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000375E39B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_35
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34420..35799)
DNA (1380bp) protein (460aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003614CFE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_36
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35942..36358)
DNA (417bp) protein (139aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain 2 id=1324848 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_37
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36469..37848)
DNA (1380bp) protein (460aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
F0F1 ATP synthase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037AAA11
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_38
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38041..38913)
DNA (873bp) protein (291aa)
ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
F0F1 ATP synthase subunit gamma n=1 Tax=Thiobacillus thioparus RepID=UPI0003781A2F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_39
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38941..40482)
DNA (1542bp) protein (514aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
F0F1 ATP synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00035C5B74
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_40
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40541..41077)
DNA (537bp) protein (179aa)
F-type H+-transporting ATP synthase, delta (OSCP) subunit (EC:3.6.3.14)
ATP synthase subunit delta id=1324844 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_41
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41081..41551)
DNA (471bp) protein (157aa)
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=12494014 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_118_42
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41606..41845)
DNA (240bp) protein (80aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=12494013 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ATP synthase F0F1 subunit C (EC:3.6.3.14)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_43
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41900..42742)
DNA (843bp) protein (281aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ATP6_THIDA
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_118_44
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42835..43212)
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=1324840 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_45
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43325..44176)
DNA (852bp) protein (284aa)
chromosome partitioning protein ParB n=1 Tax=Thiobacillus thioparus RepID=UPI00035CF4DE
chromosome segregation DNA-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_46
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44176..44958)
DNA (783bp) protein (261aa)
cobyric acid synthase CobQ n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA080
chromosome segregation ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_47
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44955..45596)
DNA (642bp) protein (214aa)
Ribosomal RNA small subunit methyltransferase G id=1324837 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
gidB; 16S rRNA methyltransferase GidB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_48
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45593..47512)
DNA (1920bp) protein (640aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381BD5C
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_49
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47576..49471)
DNA (1896bp) protein (632aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E5B11
ABC transporter ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_50
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49541..50251)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365B919
LamB/YcsF family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_118_51
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50248..51162)
DNA (915bp) protein (305aa)
allophanate hydrolase subunit 2 (EC:3.5.1.54)
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:AAZ98765.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AAZ98765.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BF6DD
RTP_02272018_0_2um_scaffold_118_52
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51159..51803)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037024F6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_53
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52009..53700)
DNA (1692bp) protein (564aa)
RNA helicase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003630CE4
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_118_54
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54027..55799)
DNA (1773bp) protein (591aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361EF1F
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_55
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55802..57142)
DNA (1341bp) protein (447aa)
tRNA modification GTPase MnmE id=1307773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA modification GTPase TrmE
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_56
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57525..60914
DNA (3390bp) protein (1130aa)
CRISPR-associated protein, Csn1 family n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FTY8_9GAMM
CRISPR-associated protein, Csn1 family
Tax=CG_Beta_01
RTP_02272018_0_2um_scaffold_118_57
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60917..61831
DNA (915bp) protein (305aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HEF2_9GAMM
CRISPR associated protein Cas1
RTP_02272018_0_2um_scaffold_118_58
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61822..62154
DNA (333bp) protein (111aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GUC9_9GAMM
CRISPR-associated Cas2 family protein
RTP_02272018_0_2um_scaffold_118_59
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63813..65450)
DNA (1638bp) protein (546aa)
Membrane protein insertase YidC id=1307774 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein translocase subunit yidC
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_118_60
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65465..65773)
DNA (309bp) protein (103aa)
ribonuclease P protein component (EC:3.1.26.5)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9350
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 31-60 of 89 in total

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