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RTP_02272018_0_2um_scaffold_277

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_277_1
unknown

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003635631
RTP_02272018_0_2um_scaffold_277_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233..895)
DNA (663bp) protein (221aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D189F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1030..2283)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=1334751 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2284..2520)
DNA (237bp) protein (79aa)
BolA family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3BF7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2535..3290)
DNA (756bp) protein (252aa)
ABC-2 type transport system permease protein id=1334753 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-2 type transport system permease
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3583..4491)
DNA (909bp) protein (303aa)
ABC-type multidrug transporter ATPase id=1334754 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type multidrug transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4488..4763)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366E6D6
NTP binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_277_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4763..5398)
DNA (636bp) protein (212aa)
signal peptide protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A6F14
signal peptide protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..7147)
DNA (1362bp) protein (454aa)
Putative Outer membrane protein id=1334756 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7144..7611)
DNA (468bp) protein (156aa)
ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382018E
ABC transporter substrate-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7611..8399)
DNA (789bp) protein (263aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_277_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..9264)
DNA (873bp) protein (291aa)
ABC transporter ATPase id=1334759 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9296..9751)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=1334760 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..11165)
DNA (1368bp) protein (456aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
cysteinyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BB49D
RTP_02272018_0_2um_scaffold_277_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11284..11838
DNA (555bp) protein (185aa)
TPR repeat-containing protein id=12497926 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_277_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11885..12376
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12381..13112
DNA (732bp) protein (244aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003778791
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_277_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13107..13763)
DNA (657bp) protein (219aa)
Putative uncharacterized protein id=1329863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13760..14929)
DNA (1170bp) protein (390aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14935..16455)
DNA (1521bp) protein (507aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037963A9
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16492..16983)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F471A
colicin V production protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16980..17603)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365F7A0
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17584..18855)
DNA (1272bp) protein (424aa)
Folylpolyglutamate synthetase id=1329868 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
folylpolyglutamate synthetase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18845..19714)
DNA (870bp) protein (290aa)
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI000377199B
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19788..20594)
DNA (807bp) protein (269aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003768D1B
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_277_26
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20614..21522)
DNA (909bp) protein (303aa)
Restriction endonuclease n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NCU0_9BURK
restriction endonuclease
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_277_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21568..21777)
DNA (210bp) protein (70aa)
Uncharacterized protein family UPF0150 id=4791989 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_02272018_0_2um_scaffold_277_28
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(21781..22035)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABI2_9PROT
conserved hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
RTP_02272018_0_2um_scaffold_277_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22038..23237)
DNA (1200bp) protein (400aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B409F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_277_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23348..23974)
DNA (627bp) protein (209aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000255|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000255|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000255|HAMAP-Rule:MF_00135};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382D2E1
Displaying items 1-30 of 63 in total

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