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RTP_02272018_0_2um_scaffold_2063_2

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(3512..3928)

Top 3 Functional Annotations

Value Algorithm Source
Predicted nucleic-acid-binding protein, contains PIN domain n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XNX4_SYNP2 similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 137.0
  • Bit_score: 140
  • Evalue 1.10e-30
nucleic acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 137.0
  • Bit_score: 140
  • Evalue 3.10e-31
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 137.0
  • Bit_score: 190
  • Evalue 1.30e-45

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Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGATCGGGCTGGACACCAATGTGCTGGCCCGCTATTACATCGCGGACAAGGCCGATGCCGAGGCGCAACGTCAACATGAGGCCGCACGCCGGCTAATTGAATCCGGCCAGGCGTTGATGGTGTGCAAAACCGTGGCGTTGGAGCTGGAATGGGTGATGCGCGGCTATTACGGCTTCAACCCACAGGAAATCGCCCGCGTTTTTCACCATCTTCTGAGCCTCGATCACGTCACGGTGGAAGACCGTGACACGCTATTGCAAGCGCTGGCACAAAGCGAAGCGGGGCTGGAAATGGCCGACGCCCTGCACCATGCGAGTTATCGCGGCTGCGATAGCATGGCTTCGTTCGACGACCAGAAATTTGCCCGCCGGGTAAAGCGTCTAGGGCTGATGCCCCGGGTTGTTGTACCTGACTGA
PROTEIN sequence
Length: 139
MIGLDTNVLARYYIADKADAEAQRQHEAARRLIESGQALMVCKTVALELEWVMRGYYGFNPQEIARVFHHLLSLDHVTVEDRDTLLQALAQSEAGLEMADALHHASYRGCDSMASFDDQKFARRVKRLGLMPRVVVPD*