ggKbase home page

RTP_02272018_0_2um_scaffold_2063

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_2063_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208..3459)
DNA (3252bp) protein (1084aa)
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF2E7
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_2063_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3512..3928)
DNA (417bp) protein (139aa)
Predicted nucleic-acid-binding protein, contains PIN domain n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XNX4_SYNP2
nucleic acid-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
RTP_02272018_0_2um_scaffold_2063_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3925..4170)
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family n=1 Tax=Thiocapsa marina 5811 RepID=F9UDD6_9GAMM
looped-hinge helix DNA binding domain, AbrB family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
RTP_02272018_0_2um_scaffold_2063_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4258..7101)
DNA (2844bp) protein (948aa)
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] id=12495255 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_2063_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7059..7382)
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B00A9
7Fe ferredoxin
7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain {ECO:0000313|EMBL:AAZ95988.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_2063_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7544..7870
DNA (327bp) protein (109aa)
thioredoxin
Thioredoxin id=1350671 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_2063_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7986..8774
DNA (789bp) protein (263aa)
transcription termination factor Rho n=1 Tax=Thiobacillus thioparus RepID=UPI00037BECBE
rho; transcription termination factor Rho
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 7 items

View Taxonomy