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RTP_02272018_0_2um_scaffold_2063_3

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(3925..4170)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AbrB family n=1 Tax=Thiocapsa marina 5811 RepID=F9UDD6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 82.0
  • Bit_score: 59
  • Evalue 1.10e-06
looped-hinge helix DNA binding domain, AbrB family similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 56.0
  • Bit_score: 51
  • Evalue 8.40e-05
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 76.0
  • Bit_score: 102
  • Evalue 2.70e-19

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Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGAAACCACATCCGTCACCAGCAAAGGCCAAGTCACCATCCCCAAGGCTGTACGACAACAACTCGGCATACGCCAAGGCAGCCGTGTGGAGTTCGAGATGGTGGGCGACCACGTTGAAATGCGGGTGCGCAGTTCGCCCACCGAGGTGGTCACCAGCGGATTTGGCATGTTGAGCAGCCGCAAGCGTGCCGTGCCCGCAGATTTTGACCCTGCCACCTTGCTCAACCCATCGCCCAAAAAATGA
PROTEIN sequence
Length: 82
METTSVTSKGQVTIPKAVRQQLGIRQGSRVEFEMVGDHVEMRVRSSPTEVVTSGFGMLSSRKRAVPADFDPATLLNPSPKK*